PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 521 522 523 524 525 526 527 528 529 ... 1720 1721 » 26201-26250 / 86044 show all
ciseli-custom	INDEL	C1_5	lowcmp_SimpleRepeat_triTR_51to200	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	C1_5	lowcmp_SimpleRepeat_triTR_51to200	homalt	0.0000	0.0000	91.6667	0	0	0	1	1	100.0000
ciseli-custom	INDEL	C1_5	map_l100_m0_e0	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	C1_5	map_l100_m1_e0	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	C1_5	map_l100_m2_e0	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	C1_5	map_l100_m2_e1	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	C1_5	map_l125_m0_e0	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	C1_5	map_l125_m1_e0	het	0.0000	0.0000	99.1803	0	0	0	2	0	0.0000
ciseli-custom	INDEL	C1_5	map_l125_m1_e0	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	C1_5	map_l125_m2_e0	het	0.0000	0.0000	99.2481	0	0	0	2	0	0.0000
ciseli-custom	INDEL	C1_5	map_l125_m2_e0	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	C1_5	map_l125_m2_e1	het	0.0000	0.0000	99.2537	0	0	0	2	0	0.0000
ciseli-custom	INDEL	C1_5	map_l125_m2_e1	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	C1_5	map_l150_m0_e0	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	C1_5	map_l150_m1_e0	het	0.0000	0.0000	99.0385	0	0	0	2	0	0.0000
ciseli-custom	INDEL	C1_5	map_l150_m1_e0	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	C1_5	map_l150_m2_e0	het	0.0000	0.0000	99.1189	0	0	0	2	0	0.0000
ciseli-custom	INDEL	C1_5	map_l150_m2_e0	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	C1_5	map_l150_m2_e1	het	0.0000	0.0000	99.1266	0	0	0	2	0	0.0000
ciseli-custom	INDEL	C1_5	map_l150_m2_e1	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	C1_5	map_l250_m0_e0	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	C1_5	map_l250_m1_e0	*	0.0000	0.0000	99.6656	0	0	0	1	0	0.0000
ciseli-custom	INDEL	C1_5	map_l250_m1_e0	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	C1_5	map_l250_m1_e0	homalt	0.0000	0.0000	99.3902	0	0	0	1	0	0.0000
ciseli-custom	INDEL	C1_5	map_l250_m2_e0	*	0.0000	0.0000	99.6970	0	0	0	1	0	0.0000
ciseli-custom	INDEL	C1_5	map_l250_m2_e0	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	C1_5	map_l250_m2_e0	homalt	0.0000	0.0000	99.4595	0	0	0	1	0	0.0000
ciseli-custom	INDEL	C1_5	map_l250_m2_e1	*	0.0000	0.0000	99.6979	0	0	0	1	0	0.0000
ciseli-custom	INDEL	C1_5	map_l250_m2_e1	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	C1_5	map_l250_m2_e1	homalt	0.0000	0.0000	99.4595	0	0	0	1	0	0.0000
ciseli-custom	INDEL	C1_5	map_siren	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	C1_5	segdup	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	C1_5	segdupwithalt	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	C1_5	tech_badpromoters	*	0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	C1_5	tech_badpromoters	het	0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	C1_5	tech_badpromoters	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	C1_5	tech_badpromoters	homalt	0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	C6_15	*	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	C6_15	HG002complexvar	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	C6_15	HG002compoundhet	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	C6_15	HG002compoundhet	homalt	0.0000	0.0000	88.2263	0	0	0	77	28	36.3636
ciseli-custom	INDEL	C6_15	decoy	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	C6_15	func_cds	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	C6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	C6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*	0.0000	0.0000	96.0000	0	0	0	1	0	0.0000
ciseli-custom	INDEL	C6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	C6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt	0.0000	0.0000	94.4444	0	0	0	1	0	0.0000
ciseli-custom	INDEL	C6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	0.0000	0.0000	0.0000	0	0	0	0	0

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge