PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecision Frac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
19601-19650 / 86044 show all
qzeng-customINDELC16_PLUSmap_l250_m2_e1het
0.0000
0.0000
86.6667
00040
0.0000
qzeng-customINDELC16_PLUSmap_l250_m2_e1hetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELC16_PLUSmap_siren*
0.0000
0.0000
83.2258
000260
0.0000
qzeng-customINDELC16_PLUSmap_sirenhet
0.0000
0.0000
80.2198
000180
0.0000
qzeng-customINDELC16_PLUSmap_sirenhetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELC16_PLUSmap_sirenhomalt
0.0000
0.0000
87.5000
00080
0.0000
qzeng-customINDELC16_PLUSsegdup*
0.0000
0.0000
98.2759
00020
0.0000
qzeng-customINDELC16_PLUSsegduphetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELC16_PLUSsegduphomalt
0.0000
0.0000
95.7447
00020
0.0000
qzeng-customINDELC16_PLUSsegdupwithalthetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELC16_PLUStech_badpromotershetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELC16_PLUStech_badpromotershomalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELC1_5func_cdshetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
0.0000
0.0000
96.8750
00030
0.0000
qzeng-customINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELC1_5lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELC1_5lowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
qzeng-customINDELC1_5lowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
qzeng-customINDELC1_5lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELC1_5lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELC1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELC1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELC1_5lowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELC1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELC1_5tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELC1_5tech_badpromotershomalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELC6_15HG002compoundhethomalt
0.0000
0.0000
84.0000
00041
25.0000
qzeng-customINDELC6_15func_cdshet
0.0000
0.0000
0.0000
00000
qzeng-customINDELC6_15func_cdshetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELC6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
0.0000
0.0000
98.7805
00010
0.0000
qzeng-customINDELC6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
0.0000
0.0000
95.6522
00011
100.0000
qzeng-customINDELC6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
0.0000
93.7500
00010
0.0000
qzeng-customINDELC6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
0.0000
91.6667
00010
0.0000
qzeng-customINDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
0.0000
0.0000
96.8750
00010
0.0000
qzeng-customINDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
0.0000
93.7500
00010
0.0000
qzeng-customINDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
0.0000
91.6667
00010
0.0000
qzeng-customINDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
0.0000
0.0000
97.9592
00011
100.0000
qzeng-customINDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
0.0000
0.0000
92.3077
00011
100.0000
qzeng-customINDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
qzeng-customINDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
qzeng-customINDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELC6_15lowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
qzeng-customINDELC6_15lowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
qzeng-customINDELC6_15lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELC6_15lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELC6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
0.0000
0.0000
95.8333
00010
0.0000