PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecision Frac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
16001-16050 / 86044 show all
anovak-vgSNP*lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNP*lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNP*lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
anovak-vgSNP*lowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.0000
0.0000
01000
anovak-vgSNP*lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNP*lowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNP*lowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
anovak-vgSNP*map_l100_m0_e0hetalt
0.0000
37.5000
0.0000
0.0000
610000
anovak-vgSNP*map_l100_m1_e0hetalt
0.0000
29.2683
0.0000
0.0000
1229000
anovak-vgSNP*map_l100_m2_e0hetalt
0.0000
30.9524
0.0000
0.0000
1329000
anovak-vgSNP*map_l100_m2_e1hetalt
0.0000
30.2326
0.0000
0.0000
1330000
anovak-vgSNP*map_l125_m0_e0hetalt
0.0000
44.4444
0.0000
0.0000
45000
anovak-vgSNP*map_l125_m1_e0hetalt
0.0000
30.0000
0.0000
0.0000
921000
anovak-vgSNP*map_l125_m2_e0hetalt
0.0000
30.0000
0.0000
0.0000
921000
anovak-vgSNP*map_l125_m2_e1hetalt
0.0000
30.0000
0.0000
0.0000
921000
anovak-vgSNP*map_l150_m0_e0hetalt
0.0000
66.6667
0.0000
0.0000
21000
anovak-vgSNP*map_l150_m1_e0hetalt
0.0000
25.0000
0.0000
0.0000
515000
anovak-vgSNP*map_l150_m2_e0hetalt
0.0000
25.0000
0.0000
0.0000
515000
anovak-vgSNP*map_l150_m2_e1hetalt
0.0000
25.0000
0.0000
0.0000
515000
anovak-vgSNP*map_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNP*map_l250_m1_e0hetalt
0.0000
25.0000
0.0000
0.0000
13000
anovak-vgSNP*map_l250_m2_e0hetalt
0.0000
20.0000
0.0000
0.0000
14000
anovak-vgSNP*map_l250_m2_e1hetalt
0.0000
20.0000
0.0000
0.0000
14000
anovak-vgSNP*map_sirenhetalt
0.0000
25.9259
0.0000
0.0000
2160000
anovak-vgSNP*segduphetalt
0.0000
14.2857
0.0000
0.0000
16000
anovak-vgSNP*segdupwithalthetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNP*tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNPti*hetalt
0.0000
15.8076
0.0000
0.0000
92490000
anovak-vgSNPtiHG002complexvarhetalt
0.0000
17.3913
0.0000
0.0000
36171000
anovak-vgSNPtiHG002compoundhethetalt
0.0000
15.8895
0.0000
0.0000
92487000
anovak-vgSNPtidecoyhet
0.0000
0.0000
99.9992
00011
100.0000
anovak-vgSNPtidecoyhetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNPtifunc_cdshetalt
0.0000
37.5000
0.0000
0.0000
35000
anovak-vgSNPtilowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNPtilowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
16.6667
0.0000
0.0000
15000
anovak-vgSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
25.0000
0.0000
0.0000
39000
anovak-vgSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
anovak-vgSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
anovak-vgSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
100.0000
0.0000
0.0000
10000
anovak-vgSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
100.0000
0.0000
0.0000
10000
anovak-vgSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
50.0000
0.0000
0.0000
11000
anovak-vgSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
25.0000
0.0000
0.0000
39000
anovak-vgSNPtilowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
100.0000
0.0000
0.0000
10000
anovak-vgSNPtilowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNPtilowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
0.0000
0.0000
02000