PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecision Frac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
15951-16000 / 86044 show all
anovak-vgINDELI6_15lowcmp_SimpleRepeat_triTR_gt200*
0.0000
0.0000
0.0000
00000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_triTR_gt200het
0.0000
0.0000
0.0000
00000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI6_15map_l100_m0_e0hetalt
0.0000
75.0000
0.0000
0.0000
31000
anovak-vgINDELI6_15map_l100_m1_e0hetalt
0.0000
45.4545
0.0000
0.0000
1012000
anovak-vgINDELI6_15map_l100_m2_e0hetalt
0.0000
45.4545
0.0000
0.0000
1012000
anovak-vgINDELI6_15map_l100_m2_e1hetalt
0.0000
45.4545
0.0000
0.0000
1012000
anovak-vgINDELI6_15map_l125_m0_e0hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI6_15map_l125_m1_e0hetalt
0.0000
62.5000
0.0000
0.0000
53000
anovak-vgINDELI6_15map_l125_m2_e0hetalt
0.0000
62.5000
0.0000
0.0000
53000
anovak-vgINDELI6_15map_l125_m2_e1hetalt
0.0000
62.5000
0.0000
0.0000
53000
anovak-vgINDELI6_15map_l150_m0_e0hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI6_15map_l150_m1_e0hetalt
0.0000
66.6667
0.0000
0.0000
21000
anovak-vgINDELI6_15map_l150_m2_e0hetalt
0.0000
66.6667
0.0000
0.0000
21000
anovak-vgINDELI6_15map_l150_m2_e1hetalt
0.0000
66.6667
0.0000
0.0000
21000
anovak-vgINDELI6_15map_l250_m0_e0het
0.0000
0.0000
98.7179
00010
0.0000
anovak-vgINDELI6_15map_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI6_15map_l250_m1_e0hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI6_15map_l250_m2_e0hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI6_15map_l250_m2_e1hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI6_15map_sirenhetalt
0.0000
30.5556
0.0000
0.0000
2250000
anovak-vgINDELI6_15segduphetalt
0.0000
20.0000
0.0000
0.0000
936000
anovak-vgINDELI6_15segdupwithalthetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI6_15tech_badpromotershetalt
0.0000
66.6667
0.0000
0.0000
21000
anovak-vgSNP**hetalt
0.0000
14.4661
0.0000
0.0000
126745000
anovak-vgSNP*HG002complexvarhetalt
0.0000
15.8065
0.0000
0.0000
49261000
anovak-vgSNP*HG002compoundhethetalt
0.0000
14.6172
0.0000
0.0000
126736000
anovak-vgSNP*decoyhet
0.0000
0.0000
99.9995
00011
100.0000
anovak-vgSNP*decoyhetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNP*func_cdshetalt
0.0000
30.0000
0.0000
0.0000
37000
anovak-vgSNP*lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNP*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNP*lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
23.0769
0.0000
0.0000
310000
anovak-vgSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
33.3333
0.0000
0.0000
510000
anovak-vgSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
anovak-vgSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
anovak-vgSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
100.0000
0.0000
0.0000
20000
anovak-vgSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
100.0000
0.0000
0.0000
20000
anovak-vgSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
66.6667
0.0000
0.0000
21000
anovak-vgSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
33.3333
0.0000
0.0000
510000
anovak-vgSNP*lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
100.0000
0.0000
0.0000
10000
anovak-vgSNP*lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNP*lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
20.0000
0.0000
0.0000
14000
anovak-vgSNP*lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNP*lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
20.0000
0.0000
0.0000
14000