PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecision Frac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
15901-15950 / 86044 show all
anovak-vgINDELI1_5map_l125_m1_e0hetalt
0.0000
41.1765
0.0000
0.0000
710000
anovak-vgINDELI1_5map_l125_m2_e0hetalt
0.0000
36.8421
0.0000
0.0000
712000
anovak-vgINDELI1_5map_l125_m2_e1hetalt
0.0000
36.8421
0.0000
0.0000
712000
anovak-vgINDELI1_5map_l150_m0_e0hetalt
0.0000
33.3333
0.0000
0.0000
12000
anovak-vgINDELI1_5map_l150_m1_e0hetalt
0.0000
44.4444
0.0000
0.0000
45000
anovak-vgINDELI1_5map_l150_m2_e0hetalt
0.0000
44.4444
0.0000
0.0000
45000
anovak-vgINDELI1_5map_l150_m2_e1hetalt
0.0000
40.0000
0.0000
0.0000
46000
anovak-vgINDELI1_5map_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI1_5map_l250_m1_e0hetalt
0.0000
50.0000
0.0000
0.0000
11000
anovak-vgINDELI1_5map_l250_m2_e0hetalt
0.0000
50.0000
0.0000
0.0000
11000
anovak-vgINDELI1_5map_l250_m2_e1hetalt
0.0000
50.0000
0.0000
0.0000
11000
anovak-vgINDELI1_5map_sirenhetalt
0.0000
32.1429
0.0000
0.0000
3676000
anovak-vgINDELI1_5segduphetalt
0.0000
27.0833
0.0000
0.0000
1335000
anovak-vgINDELI1_5segdupwithalthetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI1_5tech_badpromotershetalt
0.0000
100.0000
0.0000
0.0000
10000
anovak-vgINDELI6_15*hetalt
0.0000
22.5588
0.0000
0.0000
19296622000
anovak-vgINDELI6_15HG002complexvarhetalt
0.0000
24.9387
0.0000
0.0000
305918000
anovak-vgINDELI6_15HG002compoundhethetalt
0.0000
22.5606
0.0000
0.0000
19266611000
anovak-vgINDELI6_15decoyhetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI6_15func_cdshetalt
0.0000
25.0000
0.0000
0.0000
13000
anovak-vgINDELI6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
9.6226
0.0000
0.0000
51479000
anovak-vgINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
21.6987
0.0000
0.0000
6772443000
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
20.2779
0.0000
0.0000
7152811000
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
21.3115
0.0000
0.0000
1348000
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
18.8235
0.0000
0.0000
1669000
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
17.3077
0.0000
0.0000
943000
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
7.7135
0.0000
0.0000
28335000
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
18.6688
0.0000
0.0000
4742065000
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
20.4566
0.0000
0.0000
4481742000
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
18.7595
0.0000
0.0000
4962148000
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
20.2779
0.0000
0.0000
7152811000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
20.3275
0.0000
0.0000
3601411000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
1.2048
0.0000
0.0000
182000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
20.4545
0.0000
0.0000
935000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
02000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
22.1529
0.0000
0.0000
142499000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
8.6093
0.0000
0.0000
13138000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_quadTR_51to200homalt
0.0000
0.0000
77.7778
00021
50.0000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
29.9578
0.0000
0.0000
71166000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
8.3333
0.0000
0.0000
111000