PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 297 298 299 300 301 302 303 304 305 ... 1720 1721 » 15001-15050 / 86044 show all
anovak-vg	INDEL	C6_15	lowcmp_SimpleRepeat_quadTR_gt200	het		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C6_15	lowcmp_SimpleRepeat_quadTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C6_15	lowcmp_SimpleRepeat_quadTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C6_15	lowcmp_SimpleRepeat_triTR_11to50	*		0.0000	0.0000	86.6667	0	0	0	2	0	0.0000
anovak-vg	INDEL	C6_15	lowcmp_SimpleRepeat_triTR_11to50	het		0.0000	0.0000	84.6154	0	0	0	2	0	0.0000
anovak-vg	INDEL	C6_15	lowcmp_SimpleRepeat_triTR_11to50	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C6_15	lowcmp_SimpleRepeat_triTR_51to200	*		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C6_15	lowcmp_SimpleRepeat_triTR_51to200	het		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C6_15	lowcmp_SimpleRepeat_triTR_51to200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C6_15	lowcmp_SimpleRepeat_triTR_51to200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C6_15	lowcmp_SimpleRepeat_triTR_gt200	*		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C6_15	lowcmp_SimpleRepeat_triTR_gt200	het		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C6_15	lowcmp_SimpleRepeat_triTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C6_15	lowcmp_SimpleRepeat_triTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C6_15	map_l100_m0_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C6_15	map_l100_m0_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C6_15	map_l100_m1_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C6_15	map_l100_m2_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C6_15	map_l100_m2_e1	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C6_15	map_l125_m0_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C6_15	map_l125_m0_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C6_15	map_l125_m1_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C6_15	map_l125_m2_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C6_15	map_l125_m2_e1	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C6_15	map_l150_m0_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C6_15	map_l150_m0_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C6_15	map_l150_m1_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C6_15	map_l150_m2_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C6_15	map_l150_m2_e1	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C6_15	map_l250_m0_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C6_15	map_l250_m0_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C6_15	map_l250_m1_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C6_15	map_l250_m1_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C6_15	map_l250_m2_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C6_15	map_l250_m2_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C6_15	map_l250_m2_e1	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C6_15	map_l250_m2_e1	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C6_15	map_siren	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C6_15	segdup	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C6_15	segdupwithalt	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C6_15	tech_badpromoters	*		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C6_15	tech_badpromoters	het		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C6_15	tech_badpromoters	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	C6_15	tech_badpromoters	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	D16_PLUS	*	hetalt	0.0000	16.4511	0.0000	0.0000	318	1615	0	0	0
anovak-vg	INDEL	D16_PLUS	HG002complexvar	hetalt	0.0000	17.4089	0.0000	0.0000	43	204	0	0	0
anovak-vg	INDEL	D16_PLUS	HG002compoundhet	hetalt	0.0000	16.4938	0.0000	0.0000	318	1610	0	0	0
anovak-vg	INDEL	D16_PLUS	decoy	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	D16_PLUS	func_cds	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
anovak-vg	INDEL	D16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	0.0000	11.1795	0.0000	0.0000	109	866	0	0	0

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge