PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecision Frac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
14501-14550 / 86044 show all
ghariani-varprowlINDELI6_15map_sirenhetalt
0.0000
1.3889
0.0000
0.0000
171000
ghariani-varprowlINDELI6_15segduphetalt
0.0000
2.2222
0.0000
0.0000
144000
ghariani-varprowlINDELI6_15segdupwithalthetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlINDELI6_15tech_badpromotershetalt
0.0000
0.0000
0.0000
03000
ghariani-varprowlSNP**hetalt
0.0000
0.0000
0.0000
0871000
ghariani-varprowlSNP*HG002complexvarhetalt
0.0000
0.0000
0.0000
0310000
ghariani-varprowlSNP*HG002compoundhethetalt
0.0000
0.0000
0.0000
0862000
ghariani-varprowlSNP*decoyhetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlSNP*func_cdshetalt
0.0000
0.0000
0.0000
010000
ghariani-varprowlSNP*lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlSNP*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlSNP*lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
013000
ghariani-varprowlSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
0.0000
0.0000
015000
ghariani-varprowlSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
ghariani-varprowlSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
ghariani-varprowlSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
02000
ghariani-varprowlSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
02000
ghariani-varprowlSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
03000
ghariani-varprowlSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
0.0000
0.0000
015000
ghariani-varprowlSNP*lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.0000
0.0000
01000
ghariani-varprowlSNP*lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlSNP*lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
0.0000
0.0000
05000
ghariani-varprowlSNP*lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlSNP*lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.0000
0.0000
05000
ghariani-varprowlSNP*lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlSNP*lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlSNP*lowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.0000
0.0000
01000
ghariani-varprowlSNP*lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlSNP*lowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlSNP*lowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlSNP*map_l100_m0_e0hetalt
0.0000
0.0000
0.0000
016000
ghariani-varprowlSNP*map_l100_m1_e0hetalt
0.0000
0.0000
0.0000
041000
ghariani-varprowlSNP*map_l100_m2_e0hetalt
0.0000
0.0000
0.0000
042000
ghariani-varprowlSNP*map_l100_m2_e1hetalt
0.0000
0.0000
0.0000
043000
ghariani-varprowlSNP*map_l125_m0_e0hetalt
0.0000
0.0000
0.0000
09000
ghariani-varprowlSNP*map_l125_m1_e0hetalt
0.0000
0.0000
0.0000
030000
ghariani-varprowlSNP*map_l125_m2_e0hetalt
0.0000
0.0000
0.0000
030000
ghariani-varprowlSNP*map_l125_m2_e1hetalt
0.0000
0.0000
0.0000
030000
ghariani-varprowlSNP*map_l150_m0_e0hetalt
0.0000
0.0000
0.0000
03000
ghariani-varprowlSNP*map_l150_m1_e0hetalt
0.0000
0.0000
0.0000
020000
ghariani-varprowlSNP*map_l150_m2_e0hetalt
0.0000
0.0000
0.0000
020000
ghariani-varprowlSNP*map_l150_m2_e1hetalt
0.0000
0.0000
0.0000
020000
ghariani-varprowlSNP*map_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
ghariani-varprowlSNP*map_l250_m1_e0hetalt
0.0000
0.0000
0.0000
04000
ghariani-varprowlSNP*map_l250_m2_e0hetalt
0.0000
0.0000
0.0000
05000
ghariani-varprowlSNP*map_l250_m2_e1hetalt
0.0000
0.0000
0.0000
05000