PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecision Frac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
10851-10900 / 86044 show all
ghariani-varprowlINDELD16_PLUSmap_l250_m1_e0homalt
0.0000
100.0000
00000
ghariani-varprowlINDELD16_PLUSsegdupwithalt*
0.0000
100.0000
00000
ghariani-varprowlINDELD16_PLUSsegdupwithalthet
0.0000
100.0000
00000
ghariani-varprowlINDELD16_PLUSsegdupwithalthomalt
0.0000
100.0000
00000
ghariani-varprowlINDELD16_PLUStech_badpromotershomalt
0.0000
100.0000
00000
gduggal-snapvardSNP*map_l150_m2_e0hetalt
0.0000
0.0000
0.0000
020000
gduggal-snapvardSNP*map_l150_m2_e1hetalt
0.0000
0.0000
0.0000
020000
gduggal-snapvardSNP*map_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNP*map_l250_m1_e0hetalt
0.0000
0.0000
0.0000
04000
gduggal-snapvardSNP*map_l250_m2_e0hetalt
0.0000
0.0000
0.0000
05000
gduggal-snapvardSNP*map_l250_m2_e1hetalt
0.0000
0.0000
0.0000
05000
gduggal-snapvardSNP*map_sirenhetalt
0.0000
1.2346
0.0000
0.0000
180000
gduggal-snapvardSNP*segduphetalt
0.0000
0.0000
0.0000
07000
gduggal-snapvardSNP*segdupwithalthetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNP*tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPti*hetalt
0.0000
1.0309
0.0000
0.0000
6576000
gduggal-snapvardSNPtiHG002complexvarhetalt
0.0000
2.8986
0.0000
0.0000
6201000
gduggal-snapvardSNPtiHG002compoundhethetalt
0.0000
1.0363
0.0000
0.0000
6573000
gduggal-snapvardSNPtidecoyhetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPtifunc_cdshetalt
0.0000
0.0000
0.0000
08000
gduggal-snapvardSNPtilowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPtilowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
16.6667
0.0000
0.0000
15000
gduggal-snapvardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
8.3333
0.0000
0.0000
111000
gduggal-snapvardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
gduggal-snapvardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
gduggal-snapvardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
100.0000
0.0000
0.0000
10000
gduggal-snapvardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
100.0000
0.0000
0.0000
10000
gduggal-snapvardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
50.0000
0.0000
0.0000
11000
gduggal-snapvardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
8.3333
0.0000
0.0000
111000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
100.0000
0.0000
0.0000
10000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
0.0000
0.0000
02000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.0000
0.0000
01000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.0000
0.0000
01000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPtimap_l100_m0_e0hetalt
0.0000
0.0000
0.0000
014000
gduggal-snapvardSNPtimap_l100_m1_e0hetalt
0.0000
0.0000
0.0000
029000
gduggal-snapvardSNPtimap_l100_m2_e0hetalt
0.0000
0.0000
0.0000
030000
gduggal-snapvardSNPtimap_l100_m2_e1hetalt
0.0000
0.0000
0.0000
031000