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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt

« 1 2 ... 1697 1698 1699 1700 1701 1702 1703 1704 1705 ... 1720 1721 » 85001-85050 / 86044 show all
ckim-vqsr	INDEL	D6_15	map_l250_m0_e0	het	100.0000	100.0000	100.0000	98.7179	4	0	4	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m0_e0	homalt	100.0000	100.0000	100.0000	97.4684	2	0	2	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m1_e0	*	100.0000	100.0000	100.0000	97.7011	18	0	18	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m1_e0	het	100.0000	100.0000	100.0000	98.1034	11	0	11	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m1_e0	hetalt	100.0000	100.0000	100.0000	96.6667	2	0	2	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m1_e0	homalt	100.0000	100.0000	100.0000	96.5035	5	0	5	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m2_e0	*	100.0000	100.0000	100.0000	97.5637	22	0	22	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m2_e0	het	100.0000	100.0000	100.0000	97.8979	14	0	14	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m2_e0	hetalt	100.0000	100.0000	100.0000	97.2973	2	0	2	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m2_e0	homalt	100.0000	100.0000	100.0000	96.3190	6	0	6	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m2_e1	*	100.0000	100.0000	100.0000	97.6293	22	0	22	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m2_e1	het	100.0000	100.0000	100.0000	97.9622	14	0	14	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m2_e1	hetalt	100.0000	100.0000	100.0000	97.3333	2	0	2	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m2_e1	homalt	100.0000	100.0000	100.0000	96.3855	6	0	6	0	0
ckim-vqsr	INDEL	D6_15	map_siren	hetalt	96.8750	93.9394	100.0000	75.7180	93	6	93	0	0
ckim-vqsr	INDEL	D6_15	segdup	hetalt	94.6237	89.7959	100.0000	90.4968	44	5	44	0	0
ckim-vqsr	INDEL	D6_15	tech_badpromoters	*	100.0000	100.0000	100.0000	51.4286	17	0	17	0	0
ckim-vqsr	INDEL	D6_15	tech_badpromoters	het	100.0000	100.0000	100.0000	52.3810	10	0	10	0	0
ckim-vqsr	INDEL	D6_15	tech_badpromoters	hetalt	100.0000	100.0000	100.0000	0.0000	1	0	1	0	0
ckim-vqsr	INDEL	D6_15	tech_badpromoters	homalt	100.0000	100.0000	100.0000	53.8462	6	0	6	0	0
ckim-vqsr	INDEL	I16_PLUS	HG002complexvar	het	98.7823	97.5940	100.0000	64.8679	649	16	625	0	0
ckim-vqsr	INDEL	I16_PLUS	func_cds	*	95.6522	91.6667	100.0000	77.5510	11	1	11	0	0
ckim-vqsr	INDEL	I16_PLUS	func_cds	het	100.0000	100.0000	100.0000	70.0000	9	0	9	0	0
ckim-vqsr	INDEL	I16_PLUS	func_cds	homalt	100.0000	100.0000	100.0000	88.2353	2	0	2	0	0
ckim-vqsr	INDEL	I16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	93.1677	87.2093	100.0000	76.4205	75	11	83	0	0
egarrison-hhga	SNP	ti	map_l125_m1_e0	hetalt	95.6522	91.6667	100.0000	75.2809	22	2	22	0	0
egarrison-hhga	SNP	ti	map_l125_m2_e0	hetalt	95.6522	91.6667	100.0000	79.2453	22	2	22	0	0
egarrison-hhga	SNP	ti	map_l125_m2_e1	hetalt	95.6522	91.6667	100.0000	79.4393	22	2	22	0	0
egarrison-hhga	SNP	ti	map_l150_m0_e0	hetalt	100.0000	100.0000	100.0000	90.6250	3	0	3	0	0
egarrison-hhga	SNP	ti	map_l150_m1_e0	hetalt	92.8571	86.6667	100.0000	80.3030	13	2	13	0	0
egarrison-hhga	SNP	ti	map_l150_m2_e0	hetalt	92.8571	86.6667	100.0000	83.5443	13	2	13	0	0
egarrison-hhga	SNP	ti	map_l150_m2_e1	hetalt	92.8571	86.6667	100.0000	83.9506	13	2	13	0	0
egarrison-hhga	SNP	ti	map_l250_m1_e0	hetalt	66.6667	50.0000	100.0000	93.3333	2	2	2	0	0
egarrison-hhga	SNP	ti	map_l250_m2_e0	hetalt	75.0000	60.0000	100.0000	91.6667	3	2	3	0	0
egarrison-hhga	SNP	ti	map_l250_m2_e1	hetalt	75.0000	60.0000	100.0000	91.6667	3	2	3	0	0
egarrison-hhga	SNP	ti	segdup	hetalt	100.0000	100.0000	100.0000	99.1189	2	0	2	0	0
egarrison-hhga	SNP	ti	tech_badpromoters	*	100.0000	100.0000	100.0000	46.5409	85	0	85	0	0
egarrison-hhga	SNP	ti	tech_badpromoters	het	100.0000	100.0000	100.0000	46.9880	44	0	44	0	0
egarrison-hhga	SNP	ti	tech_badpromoters	homalt	100.0000	100.0000	100.0000	46.0526	41	0	41	0	0
egarrison-hhga	SNP	tv	func_cds	hetalt	100.0000	100.0000	100.0000	56.5217	10	0	10	0	0
egarrison-hhga	SNP	tv	func_cds	homalt	100.0000	100.0000	100.0000	26.8356	1704	0	1704	0	0
egarrison-hhga	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	100.0000	100.0000	100.0000	92.7536	15	0	15	0	0
egarrison-hhga	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	88.8889	1	0	1	0	0
egarrison-hhga	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	80.0000	1	0	1	0	0
egarrison-hhga	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	99.8092	99.6190	100.0000	67.6961	523	2	523	0	0
egarrison-hhga	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	86.6667	2	0	2	0	0
egarrison-hhga	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	84.6154	2	0	2	0	0
egarrison-hhga	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	96.1538	3	0	3	0	0
egarrison-hhga	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	100.0000	100.0000	100.0000	92.7536	15	0	15	0	0
egarrison-hhga	SNP	tv	lowcmp_SimpleRepeat_diTR_11to50	hetalt	100.0000	100.0000	100.0000	95.0000	1	0	1	0	0

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