PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecision Frac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
83751-83800 / 86044 show all
jli-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
98.0392
96.1538
100.0000
54.4643
5025100
jli-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
67.3077
6806800
jli-customINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10*
98.3607
96.7742
100.0000
81.6176
150515000
jli-customINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10het
99.1870
98.3871
100.0000
85.0123
6116100
jli-customINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10hetalt
96.4706
93.1818
100.0000
73.8854
4134100
jli-customINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
98.9691
97.9592
100.0000
80.9524
4814800
jli-customINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.8500
20200
jli-customINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.4203
20200
jli-customINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
97.8486
95.7878
100.0000
40.6160
6142761700
jli-customINDELI6_15lowcmp_SimpleRepeat_quadTR_51to200het
93.9394
88.5714
100.0000
89.0625
3142800
jli-customINDELI6_15lowcmp_SimpleRepeat_quadTR_51to200hetalt
97.2789
94.7020
100.0000
44.1948
143814900
jli-customINDELI6_15lowcmp_SimpleRepeat_triTR_11to50*
99.1556
98.3254
100.0000
44.6980
411741200
jli-customINDELI6_15lowcmp_SimpleRepeat_triTR_11to50het
97.9079
95.9016
100.0000
58.5714
117511600
jli-customINDELI6_15lowcmp_SimpleRepeat_triTR_11to50hetalt
99.5763
99.1561
100.0000
24.0385
235223700
jli-customINDELI6_15lowcmp_SimpleRepeat_triTR_11to50homalt
100.0000
100.0000
100.0000
61.4379
5905900
jli-customINDELI6_15lowcmp_SimpleRepeat_triTR_51to200hetalt
95.6522
91.6667
100.0000
36.8421
1111200
jli-customINDELI6_15map_l100_m0_e0hetalt
85.7143
75.0000
100.0000
90.9091
31300
jli-customINDELI6_15map_l100_m0_e0homalt
95.6522
91.6667
100.0000
88.5417
1111100
jli-customINDELI6_15map_l100_m1_e0hetalt
97.6744
95.4545
100.0000
79.6117
2112100
jli-customINDELI6_15map_l100_m1_e0homalt
96.8750
93.9394
100.0000
85.8447
3123100
jli-customINDELI6_15map_l100_m2_e0hetalt
97.6744
95.4545
100.0000
81.8966
2112100
jli-customINDELI6_15map_l100_m2_e0homalt
96.8750
93.9394
100.0000
87.1369
3123100
jli-customINDELI6_15map_l100_m2_e1hetalt
97.6744
95.4545
100.0000
82.5000
2112100
jli-customINDELI6_15map_l100_m2_e1homalt
96.8750
93.9394
100.0000
87.6000
3123100
jli-customINDELI6_15map_l125_m0_e0homalt
90.9091
83.3333
100.0000
93.0556
51500
jli-customINDELI6_15map_l125_m1_e0hetalt
100.0000
100.0000
100.0000
84.9057
80800
jli-customINDELI6_15map_l125_m1_e0homalt
96.5517
93.3333
100.0000
90.4110
1411400
jli-customINDELI6_15map_l125_m2_e0hetalt
100.0000
100.0000
100.0000
87.5000
80800
jli-customINDELI6_15map_l125_m2_e0homalt
96.5517
93.3333
100.0000
91.6168
1411400
jli-customINDELI6_15map_l125_m2_e1hetalt
100.0000
100.0000
100.0000
87.8788
80800
jli-customINDELI6_15map_l125_m2_e1homalt
96.5517
93.3333
100.0000
92.0904
1411400
jli-customINDELI6_15map_l150_m0_e0homalt
85.7143
75.0000
100.0000
94.8276
31300
jli-customINDELI6_15map_l150_m1_e0hetalt
100.0000
100.0000
100.0000
91.4286
30300
jli-customINDELI6_15map_l150_m1_e0homalt
92.3077
85.7143
100.0000
94.5946
61600
jli-customINDELI6_15map_l150_m2_e0hetalt
100.0000
100.0000
100.0000
93.1818
30300
jli-customINDELI6_15map_l150_m2_e0homalt
92.3077
85.7143
100.0000
95.3125
61600
jli-customINDELI6_15map_l150_m2_e1hetalt
100.0000
100.0000
100.0000
93.4783
30300
jli-customINDELI6_15map_l150_m2_e1homalt
93.3333
87.5000
100.0000
94.9275
71700
jli-customINDELI6_15map_l250_m1_e0homalt
80.0000
66.6667
100.0000
97.0149
21200
jli-customINDELI6_15map_l250_m2_e0homalt
80.0000
66.6667
100.0000
97.2222
21200
jli-customINDELI6_15map_l250_m2_e1homalt
80.0000
66.6667
100.0000
97.4359
21200
jli-customINDELI6_15map_sirenhetalt
97.1429
94.4444
100.0000
77.5578
6846800
jli-customINDELI6_15segdup*
98.5507
97.1429
100.0000
91.7715
170517000
jli-customINDELI6_15segduphet
98.7805
97.5904
100.0000
92.5346
8128100
jli-customINDELI6_15segduphetalt
97.7273
95.5556
100.0000
90.0693
4324300
jli-customINDELI6_15segduphomalt
98.9247
97.8723
100.0000
91.6058
4614600
jli-customINDELI6_15tech_badpromoters*
100.0000
100.0000
100.0000
53.5714
1301300
jli-customINDELI6_15tech_badpromotershet
100.0000
100.0000
100.0000
50.0000
70700
jli-customINDELI6_15tech_badpromotershetalt
100.0000
100.0000
100.0000
50.0000
30300
jli-customINDELI6_15tech_badpromotershomalt
100.0000
100.0000
100.0000
62.5000
30300