PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecision Frac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
82851-82900 / 86044 show all
jlack-gatkINDELI16_PLUSmap_l125_m2_e1hetalt
80.0000
66.6667
100.0000
92.0000
21200
jlack-gatkINDELI16_PLUSmap_l125_m2_e1homalt
80.0000
66.6667
100.0000
99.0338
21200
jlack-gatkINDELI16_PLUSmap_l150_m0_e0hetalt
100.0000
100.0000
100.0000
83.3333
10100
jlack-gatkINDELI16_PLUSmap_l150_m0_e0homalt
100.0000
100.0000
100.0000
99.1935
10100
jlack-gatkINDELI16_PLUSmap_l150_m1_e0hetalt
66.6667
50.0000
100.0000
93.3333
11100
jlack-gatkINDELI16_PLUSmap_l150_m1_e0homalt
80.0000
66.6667
100.0000
98.8506
21200
jlack-gatkINDELI16_PLUSmap_l150_m2_e0hetalt
66.6667
50.0000
100.0000
93.7500
11100
jlack-gatkINDELI16_PLUSmap_l150_m2_e0homalt
80.0000
66.6667
100.0000
98.9071
21200
jlack-gatkINDELI16_PLUSmap_l150_m2_e1hetalt
66.6667
50.0000
100.0000
93.7500
11100
jlack-gatkINDELI16_PLUSmap_l150_m2_e1homalt
80.0000
66.6667
100.0000
98.9071
21200
jlack-gatkINDELI16_PLUSmap_sirenhetalt
96.7742
93.7500
100.0000
86.2069
1511600
jlack-gatkINDELI16_PLUSsegduphetalt
85.7143
75.0000
100.0000
98.0645
31300
jlack-gatkINDELI16_PLUSsegduphomalt
100.0000
100.0000
100.0000
94.8370
1901900
jlack-gatkINDELI16_PLUStech_badpromoters*
100.0000
100.0000
100.0000
66.6667
40400
jlack-gatkINDELI16_PLUStech_badpromotershet
100.0000
100.0000
100.0000
60.0000
20200
jlack-gatkINDELI16_PLUStech_badpromotershomalt
100.0000
100.0000
100.0000
66.6667
20200
jlack-gatkINDELI1_5func_cdshetalt
100.0000
100.0000
100.0000
33.3333
20200
jlack-gatkINDELI1_5func_cdshomalt
100.0000
100.0000
100.0000
30.4094
119011900
jlack-gatkINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.8601
10100
jlack-gatkINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.6667
10100
jlack-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
92.3077
85.7143
100.0000
59.7765
72127200
jlack-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.8553
10100
jlack-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.4286
10100
jlack-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
97.7169
95.5357
100.0000
75.9551
107510700
jlack-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
98.3051
96.6667
100.0000
82.3708
5825800
jlack-gatkINDELI1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
98.1998
96.4633
100.0000
41.4933
109140109700
jlack-gatkINDELI1_5lowcmp_SimpleRepeat_quadTR_51to200hetalt
94.9153
90.3226
100.0000
39.1176
1962120700
jlack-gatkINDELI1_5lowcmp_SimpleRepeat_quadTR_51to200homalt
100.0000
100.0000
100.0000
99.0385
10100
jlack-gatkINDELI1_5lowcmp_SimpleRepeat_triTR_51to200*
91.3043
84.0000
100.0000
63.1579
2142100
jlack-gatkINDELI1_5lowcmp_SimpleRepeat_triTR_51to200het
100.0000
100.0000
100.0000
93.7500
20200
jlack-gatkINDELI1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
90.4762
82.6087
100.0000
13.6364
1941900
jlack-gatkINDELI1_5map_l100_m0_e0hetalt
100.0000
100.0000
100.0000
94.1558
90900
jlack-gatkINDELI1_5map_l100_m1_e0hetalt
95.2381
90.9091
100.0000
90.1720
4044000
jlack-gatkINDELI1_5map_l100_m2_e0hetalt
95.2381
90.9091
100.0000
90.9502
4044000
jlack-gatkINDELI1_5map_l100_m2_e1hetalt
95.3488
91.1111
100.0000
90.8686
4144100
jlack-gatkINDELI1_5map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
96.4286
40400
jlack-gatkINDELI1_5map_l125_m1_e0hetalt
100.0000
100.0000
100.0000
94.1781
1701700
jlack-gatkINDELI1_5map_l125_m2_e0hetalt
97.2973
94.7368
100.0000
94.5122
1811800
jlack-gatkINDELI1_5map_l125_m2_e1hetalt
97.2973
94.7368
100.0000
94.5619
1811800
jlack-gatkINDELI1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
96.6292
30300
jlack-gatkINDELI1_5map_l150_m1_e0hetalt
100.0000
100.0000
100.0000
95.8716
90900
jlack-gatkINDELI1_5map_l150_m2_e0hetalt
100.0000
100.0000
100.0000
96.4286
90900
jlack-gatkINDELI1_5map_l150_m2_e1hetalt
100.0000
100.0000
100.0000
96.1089
1001000
jlack-gatkINDELI1_5map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
98.4127
20200
jlack-gatkINDELI1_5map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
98.6842
20200
jlack-gatkINDELI1_5map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
98.7013
20200
jlack-gatkINDELI1_5map_sirenhetalt
97.2477
94.6429
100.0000
87.9682
106610600
jlack-gatkINDELI1_5segduphetalt
97.8723
95.8333
100.0000
96.2036
4624700
jlack-gatkINDELI1_5tech_badpromoters*
100.0000
100.0000
100.0000
52.1739
2202200
jlack-gatkINDELI1_5tech_badpromotershet
100.0000
100.0000
100.0000
42.8571
80800