PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecision Frac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
82101-82150 / 86044 show all
hfeng-pmm3INDELD6_15func_cdshomalt
100.0000
100.0000
100.0000
57.1429
1201200
hfeng-pmm3INDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
96.7213
60600
hfeng-pmm3INDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.5207
30300
hfeng-pmm3INDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
90.0000
20200
hfeng-pmm3INDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
97.6190
10100
hfeng-pmm3INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
90.1408
82.0513
100.0000
61.4458
3273200
hfeng-pmm3INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
98.8235
97.6744
100.0000
76.5363
4214200
hfeng-pmm3INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.5155
40400
hfeng-pmm3INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.1651
20200
hfeng-pmm3INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
84.6154
20200
hfeng-pmm3INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
97.1963
94.5455
100.0000
63.9456
5235300
hfeng-pmm3INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
96.8750
93.9394
100.0000
63.6364
3123200
hfeng-pmm3INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
90.9091
20200
hfeng-pmm3INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
91.6667
10100
hfeng-pmm3INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
66.6667
10100
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10*
99.2424
98.4962
100.0000
80.9731
262426200
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10het
99.0228
98.0645
100.0000
82.9596
152315200
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10hetalt
98.6301
97.2973
100.0000
63.2653
3613600
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
100.0000
100.0000
100.0000
80.8786
7407400
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.1045
90900
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
99.1468
98.3080
100.0000
27.7467
116220116400
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_triTR_11to50hetalt
99.4836
98.9726
100.0000
18.6798
578657900
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_triTR_11to50homalt
99.8870
99.7743
100.0000
32.1045
442144200
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_triTR_51to200hetalt
97.8947
95.8763
100.0000
23.1405
9349300
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
30.0000
2102100
hfeng-pmm3INDELD6_15map_l100_m0_e0hetalt
94.4444
89.4737
100.0000
81.5217
1721700
hfeng-pmm3INDELD6_15map_l100_m0_e0homalt
97.8723
95.8333
100.0000
87.8307
2312300
hfeng-pmm3INDELD6_15map_l100_m1_e0hetalt
94.5736
89.7059
100.0000
71.7593
6176100
hfeng-pmm3INDELD6_15map_l100_m1_e0homalt
98.4127
96.8750
100.0000
83.3333
6226200
hfeng-pmm3INDELD6_15map_l100_m2_e0hetalt
94.5736
89.7059
100.0000
73.5931
6176100
hfeng-pmm3INDELD6_15map_l100_m2_e0homalt
98.4375
96.9231
100.0000
84.0909
6326300
hfeng-pmm3INDELD6_15map_l100_m2_e1hetalt
93.4307
87.6712
100.0000
73.7705
6496400
hfeng-pmm3INDELD6_15map_l100_m2_e1homalt
98.4848
97.0149
100.0000
84.0686
6526500
hfeng-pmm3INDELD6_15map_l125_m0_e0*
98.9247
97.8723
100.0000
92.0000
4614600
hfeng-pmm3INDELD6_15map_l125_m0_e0het
98.2456
96.5517
100.0000
92.7273
2812800
hfeng-pmm3INDELD6_15map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
88.8889
60600
hfeng-pmm3INDELD6_15map_l125_m0_e0homalt
100.0000
100.0000
100.0000
91.1765
1201200
hfeng-pmm3INDELD6_15map_l125_m1_e0*
98.2609
96.5812
100.0000
88.8008
113411300
hfeng-pmm3INDELD6_15map_l125_m1_e0het
98.4127
96.8750
100.0000
90.4908
6226200
hfeng-pmm3INDELD6_15map_l125_m1_e0hetalt
97.2973
94.7368
100.0000
84.0708
1811800
hfeng-pmm3INDELD6_15map_l125_m1_e0homalt
98.5075
97.0588
100.0000
86.4754
3313300
hfeng-pmm3INDELD6_15map_l125_m2_e0*
97.9757
96.0317
100.0000
89.1577
121512100
hfeng-pmm3INDELD6_15map_l125_m2_e0het
97.8417
95.7746
100.0000
90.5556
6836800
hfeng-pmm3INDELD6_15map_l125_m2_e0hetalt
97.2973
94.7368
100.0000
86.2595
1811800
hfeng-pmm3INDELD6_15map_l125_m2_e0homalt
98.5915
97.2222
100.0000
86.7925
3513500
hfeng-pmm3INDELD6_15map_l125_m2_e1*
97.6000
95.3125
100.0000
89.3263
122612200
hfeng-pmm3INDELD6_15map_l125_m2_e1het
97.8417
95.7746
100.0000
90.7609
6836800
hfeng-pmm3INDELD6_15map_l125_m2_e1hetalt
94.7368
90.0000
100.0000
86.6667
1821800
hfeng-pmm3INDELD6_15map_l125_m2_e1homalt
98.6301
97.2973
100.0000
86.7647
3613600
hfeng-pmm3INDELD6_15map_l150_m0_e0*
100.0000
100.0000
100.0000
93.1624
3203200