PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecision Frac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
80901-80950 / 86044 show all
rpoplin-dv42INDELD16_PLUSmap_l250_m2_e1*
100.0000
100.0000
100.0000
96.5986
50500
rpoplin-dv42INDELD16_PLUSmap_l250_m2_e1het
100.0000
100.0000
100.0000
96.5517
30300
rpoplin-dv42INDELD16_PLUSmap_l250_m2_e1hetalt
100.0000
100.0000
100.0000
92.3077
10100
rpoplin-dv42INDELD16_PLUSmap_l250_m2_e1homalt
100.0000
100.0000
100.0000
97.8723
10100
rpoplin-dv42INDELD16_PLUSmap_sirenhetalt
80.7692
67.7419
100.0000
73.8095
21102200
rpoplin-dv42INDELD16_PLUSsegduphetalt
80.0000
66.6667
100.0000
93.4783
63600
rpoplin-dv42INDELD16_PLUSsegduphomalt
100.0000
100.0000
100.0000
94.5946
1201200
rpoplin-dv42INDELD16_PLUStech_badpromoters*
100.0000
100.0000
100.0000
33.3333
40400
rpoplin-dv42INDELD16_PLUStech_badpromotershet
100.0000
100.0000
100.0000
0.0000
40400
rpoplin-dv42INDELD1_5decoy*
100.0000
100.0000
100.0000
99.9439
40400
rpoplin-dv42INDELD1_5decoyhet
100.0000
100.0000
100.0000
99.9601
20200
rpoplin-dv42INDELD1_5decoyhetalt
100.0000
100.0000
100.0000
99.6700
10100
rpoplin-dv42INDELD1_5decoyhomalt
100.0000
100.0000
100.0000
99.9450
10100
rpoplin-dv42INDELD1_5func_cds*
100.0000
100.0000
100.0000
40.7407
159016000
rpoplin-dv42INDELD1_5func_cdshet
100.0000
100.0000
100.0000
45.9119
8508600
rpoplin-dv42INDELD1_5func_cdshomalt
100.0000
100.0000
100.0000
31.4815
7407400
rpoplin-dv42INDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
95.2381
90.9091
100.0000
99.2679
1011000
rpoplin-dv42INDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
93.3333
87.5000
100.0000
99.1453
71700
rpoplin-dv42INDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
98.3333
10100
rpoplin-dv42INDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.5893
20200
rpoplin-dv42INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
93.0233
86.9565
100.0000
58.0420
6096000
rpoplin-dv42INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
94.7368
90.0000
100.0000
99.3088
91900
rpoplin-dv42INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
92.3077
85.7143
100.0000
99.2258
61600
rpoplin-dv42INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
98.1132
10100
rpoplin-dv42INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.5781
20200
rpoplin-dv42INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
98.5075
10100
rpoplin-dv42INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.8261
10100
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.9991
10100
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.9907
10100
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_triTR_11to50homalt
99.9248
99.8496
100.0000
40.4484
13282132800
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
64.8649
1301300
rpoplin-dv42INDELD1_5map_l100_m0_e0hetalt
96.2963
92.8571
100.0000
95.4064
1311300
rpoplin-dv42INDELD1_5map_l100_m1_e0hetalt
97.8261
95.7447
100.0000
92.0635
4524500
rpoplin-dv42INDELD1_5map_l100_m2_e0hetalt
97.8723
95.8333
100.0000
92.3205
4624600
rpoplin-dv42INDELD1_5map_l100_m2_e1hetalt
98.0000
96.0784
100.0000
92.0195
4924900
rpoplin-dv42INDELD1_5map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
98.5714
30300
rpoplin-dv42INDELD1_5map_l125_m1_e0hetalt
96.0000
92.3077
100.0000
96.8668
1211200
rpoplin-dv42INDELD1_5map_l125_m2_e0hetalt
96.5517
93.3333
100.0000
96.6903
1411400
rpoplin-dv42INDELD1_5map_l125_m2_e1hetalt
96.5517
93.3333
100.0000
96.7742
1411400
rpoplin-dv42INDELD1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
98.8304
20200
rpoplin-dv42INDELD1_5map_l150_m1_e0hetalt
92.3077
85.7143
100.0000
98.1538
61600
rpoplin-dv42INDELD1_5map_l150_m2_e0hetalt
92.3077
85.7143
100.0000
98.3333
61600
rpoplin-dv42INDELD1_5map_l150_m2_e1hetalt
93.3333
87.5000
100.0000
98.1081
71700
rpoplin-dv42INDELD1_5map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
98.5075
30300
rpoplin-dv42INDELD1_5map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
98.7179
30300
rpoplin-dv42INDELD1_5map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
98.7448
30300
rpoplin-dv42INDELD1_5segduphetalt
98.0392
96.1538
100.0000
95.9645
5025000
rpoplin-dv42INDELD1_5segduphomalt
99.7207
99.4429
100.0000
94.4210
357235700
rpoplin-dv42INDELD1_5segdupwithalt*
100.0000
100.0000
100.0000
99.9937
10100
rpoplin-dv42INDELD1_5segdupwithalthet
100.0000
100.0000
100.0000
99.9898
10100