PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecision Frac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
80751-80800 / 86044 show all
ndellapenna-hhgaINDELD6_15map_l250_m2_e0hetalt
66.6667
50.0000
100.0000
96.9697
11100
ndellapenna-hhgaINDELD6_15map_l250_m2_e0homalt
100.0000
100.0000
100.0000
96.1290
60600
ndellapenna-hhgaINDELD6_15map_l250_m2_e1hetalt
66.6667
50.0000
100.0000
97.1429
11100
ndellapenna-hhgaINDELD6_15map_l250_m2_e1homalt
100.0000
100.0000
100.0000
96.1783
60600
ndellapenna-hhgaINDELD6_15segduphetalt
71.0526
55.1020
100.0000
90.5303
27222500
ndellapenna-hhgaINDELD6_15tech_badpromoters*
93.7500
88.2353
100.0000
57.1429
1521500
ndellapenna-hhgaINDELD6_15tech_badpromotershet
94.7368
90.0000
100.0000
55.0000
91900
ndellapenna-hhgaINDELD6_15tech_badpromotershomalt
100.0000
100.0000
100.0000
60.0000
60600
ndellapenna-hhgaINDELI16_PLUSfunc_cds*
95.6522
91.6667
100.0000
74.4186
1111100
ndellapenna-hhgaINDELI16_PLUSfunc_cdshet
100.0000
100.0000
100.0000
64.0000
90900
ndellapenna-hhgaINDELI16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
87.5000
20200
ndellapenna-hhgaINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
87.5000
77.7778
100.0000
78.9474
1441600
ndellapenna-hhgaINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
92.3077
85.7143
100.0000
70.0935
3053200
ndellapenna-hhgaINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
96.0784
92.4528
100.0000
70.6587
4944900
ndellapenna-hhgaINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
97.4359
95.0000
100.0000
62.7451
1911900
ndellapenna-hhgaINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
80.8511
67.8571
100.0000
58.3333
1992000
ndellapenna-hhgaINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_51to200hetalt
75.6757
60.8696
100.0000
71.4286
1491400
ndellapenna-hhgaINDELI16_PLUSlowcmp_SimpleRepeat_triTR_11to50het
96.7742
93.7500
100.0000
80.7692
1511500
ndellapenna-hhgaINDELI16_PLUSlowcmp_SimpleRepeat_triTR_11to50hetalt
86.9565
76.9231
100.0000
69.6970
1031000
ndellapenna-hhgaINDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200*
40.0000
25.0000
100.0000
83.3333
13100
ndellapenna-hhgaINDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200hetalt
66.6667
50.0000
100.0000
50.0000
11100
ndellapenna-hhgaINDELI16_PLUSmap_l100_m0_e0hetalt
100.0000
100.0000
100.0000
83.3333
10100
ndellapenna-hhgaINDELI16_PLUSmap_l100_m1_e0hetalt
100.0000
100.0000
100.0000
85.0000
30300
ndellapenna-hhgaINDELI16_PLUSmap_l100_m2_e0hetalt
100.0000
100.0000
100.0000
87.5000
30300
ndellapenna-hhgaINDELI16_PLUSmap_l100_m2_e1hetalt
100.0000
100.0000
100.0000
88.0000
30300
ndellapenna-hhgaINDELI16_PLUSmap_l125_m0_e0hetalt
100.0000
100.0000
100.0000
75.0000
10100
ndellapenna-hhgaINDELI16_PLUSmap_l125_m0_e0homalt
66.6667
50.0000
100.0000
92.8571
11100
ndellapenna-hhgaINDELI16_PLUSmap_l125_m1_e0hetalt
100.0000
100.0000
100.0000
76.9231
30300
ndellapenna-hhgaINDELI16_PLUSmap_l125_m1_e0homalt
50.0000
33.3333
100.0000
96.1538
12100
ndellapenna-hhgaINDELI16_PLUSmap_l125_m2_e0hetalt
100.0000
100.0000
100.0000
76.9231
30300
ndellapenna-hhgaINDELI16_PLUSmap_l125_m2_e0homalt
50.0000
33.3333
100.0000
97.2222
12100
ndellapenna-hhgaINDELI16_PLUSmap_l125_m2_e1hetalt
100.0000
100.0000
100.0000
76.9231
30300
ndellapenna-hhgaINDELI16_PLUSmap_l125_m2_e1homalt
50.0000
33.3333
100.0000
97.2222
12100
ndellapenna-hhgaINDELI16_PLUSmap_l150_m0_e0hetalt
100.0000
100.0000
100.0000
75.0000
10100
ndellapenna-hhgaINDELI16_PLUSmap_l150_m0_e0homalt
100.0000
100.0000
100.0000
91.6667
10100
ndellapenna-hhgaINDELI16_PLUSmap_l150_m1_e0hetalt
100.0000
100.0000
100.0000
71.4286
20200
ndellapenna-hhgaINDELI16_PLUSmap_l150_m1_e0homalt
50.0000
33.3333
100.0000
95.0000
12100
ndellapenna-hhgaINDELI16_PLUSmap_l150_m2_e0hetalt
100.0000
100.0000
100.0000
71.4286
20200
ndellapenna-hhgaINDELI16_PLUSmap_l150_m2_e0homalt
50.0000
33.3333
100.0000
96.2963
12100
ndellapenna-hhgaINDELI16_PLUSmap_l150_m2_e1hetalt
100.0000
100.0000
100.0000
71.4286
20200
ndellapenna-hhgaINDELI16_PLUSmap_l150_m2_e1homalt
50.0000
33.3333
100.0000
96.2963
12100
ndellapenna-hhgaINDELI16_PLUSsegduphetalt
100.0000
100.0000
100.0000
97.0588
40300
ndellapenna-hhgaINDELI16_PLUSsegduphomalt
97.2973
94.7368
100.0000
91.8182
1811800
ndellapenna-hhgaINDELI16_PLUStech_badpromoters*
100.0000
100.0000
100.0000
66.6667
40400
ndellapenna-hhgaINDELI16_PLUStech_badpromotershet
100.0000
100.0000
100.0000
60.0000
20200
ndellapenna-hhgaINDELI16_PLUStech_badpromotershomalt
100.0000
100.0000
100.0000
66.6667
20200
ndellapenna-hhgaINDELI1_5func_cdshetalt
100.0000
100.0000
100.0000
50.0000
20200
ndellapenna-hhgaINDELI1_5func_cdshomalt
100.0000
100.0000
100.0000
29.5858
119011900
ndellapenna-hhgaINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.9261
10100
ndellapenna-hhgaINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
98.2759
10100