PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecision Frac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
80601-80650 / 86044 show all
mlin-fermikitINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
92.3077
85.7143
100.0000
99.0964
61600
mlin-fermikitINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.4286
10100
mlin-fermikitINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
89.5522
81.0811
100.0000
77.2201
60145900
mlin-fermikitINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
91.1765
83.7838
100.0000
84.4560
3163000
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_quadTR_51to200hetalt
56.8282
39.6923
100.0000
35.3808
25839226300
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
51.5152
34.6939
100.0000
32.0000
17321700
mlin-fermikitINDELD1_5map_l100_m0_e0hetalt
66.6667
50.0000
100.0000
90.4110
77700
mlin-fermikitINDELD1_5map_l100_m1_e0hetalt
63.7681
46.8085
100.0000
89.1089
22252200
mlin-fermikitINDELD1_5map_l100_m2_e0hetalt
62.8571
45.8333
100.0000
89.5928
22262300
mlin-fermikitINDELD1_5map_l100_m2_e1hetalt
64.0000
47.0588
100.0000
89.0351
24272500
mlin-fermikitINDELD1_5map_l125_m0_e0hetalt
50.0000
33.3333
100.0000
97.5000
12100
mlin-fermikitINDELD1_5map_l125_m1_e0hetalt
76.1905
61.5385
100.0000
92.1569
85800
mlin-fermikitINDELD1_5map_l125_m2_e0hetalt
75.0000
60.0000
100.0000
92.8000
96900
mlin-fermikitINDELD1_5map_l125_m2_e1hetalt
75.0000
60.0000
100.0000
93.0233
96900
mlin-fermikitINDELD1_5map_l150_m0_e0hetalt
66.6667
50.0000
100.0000
95.6522
11100
mlin-fermikitINDELD1_5map_l150_m1_e0hetalt
60.0000
42.8571
100.0000
95.7143
34300
mlin-fermikitINDELD1_5map_l150_m2_e0hetalt
60.0000
42.8571
100.0000
96.3415
34300
mlin-fermikitINDELD1_5map_l150_m2_e1hetalt
66.6667
50.0000
100.0000
95.3488
44400
mlin-fermikitINDELD1_5map_l250_m1_e0hetalt
80.0000
66.6667
100.0000
92.8571
21200
mlin-fermikitINDELD1_5map_l250_m2_e0hetalt
80.0000
66.6667
100.0000
95.0000
21200
mlin-fermikitINDELD1_5map_l250_m2_e1hetalt
80.0000
66.6667
100.0000
95.3488
21200
mlin-fermikitINDELD1_5map_sirenhetalt
75.5556
60.7143
100.0000
88.1119
51335100
mlin-fermikitINDELD1_5segduphetalt
85.7143
75.0000
100.0000
94.3820
39134000
mlin-fermikitINDELD1_5segdupwithalt*
100.0000
100.0000
100.0000
99.9907
10100
mlin-fermikitINDELD1_5segdupwithalthet
100.0000
100.0000
100.0000
99.9838
10100
mlin-fermikitINDELD1_5tech_badpromotershetalt
66.6667
50.0000
100.0000
0.0000
11100
mlin-fermikitINDELD1_5tech_badpromotershomalt
100.0000
100.0000
100.0000
43.7500
90900
mlin-fermikitINDELD6_15decoy*
100.0000
100.0000
100.0000
99.8962
10100
mlin-fermikitINDELD6_15decoyhetalt
100.0000
100.0000
100.0000
98.6842
10100
mlin-fermikitINDELD6_15func_cds*
97.6190
95.3488
100.0000
48.7500
4124100
mlin-fermikitINDELD6_15func_cdshet
98.2456
96.5517
100.0000
36.3636
2812800
mlin-fermikitINDELD6_15func_cdshetalt
66.6667
50.0000
100.0000
80.0000
11100
mlin-fermikitINDELD6_15func_cdshomalt
100.0000
100.0000
100.0000
61.2903
1201200
mlin-fermikitINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
98.7342
10100
mlin-fermikitINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
76.1905
61.5385
100.0000
64.7059
24152400
mlin-fermikitINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
84.2105
72.7273
100.0000
61.9048
40154000
mlin-fermikitINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
88.1356
78.7879
100.0000
55.9322
2672600
mlin-fermikitINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
91.6667
20200
mlin-fermikitINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
91.6667
10100
mlin-fermikitINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
90.0000
10100
mlin-fermikitINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10hetalt
70.1754
54.0541
100.0000
66.6667
20172000
mlin-fermikitINDELD6_15lowcmp_SimpleRepeat_triTR_51to200hetalt
54.1353
37.1134
100.0000
32.0755
36613600
mlin-fermikitINDELD6_15map_l250_m1_e0hetalt
66.6667
50.0000
100.0000
87.5000
11100
mlin-fermikitINDELD6_15map_l250_m2_e0hetalt
66.6667
50.0000
100.0000
93.3333
11100
mlin-fermikitINDELD6_15map_l250_m2_e1hetalt
66.6667
50.0000
100.0000
93.3333
11100
mlin-fermikitINDELD6_15segduphetalt
74.3590
59.1837
100.0000
89.2193
29202900
mlin-fermikitINDELD6_15tech_badpromotershet
88.8889
80.0000
100.0000
52.9412
82800
mlin-fermikitINDELD6_15tech_badpromotershetalt
100.0000
100.0000
100.0000
0.0000
10100
mlin-fermikitINDELI16_PLUSfunc_cds*
90.9091
83.3333
100.0000
77.2727
1021000
mlin-fermikitINDELI16_PLUSfunc_cdshet
94.1176
88.8889
100.0000
66.6667
81800