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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt

« 1 2 ... 1595 1596 1597 1598 1599 1600 1601 1602 1603 ... 1720 1721 » 79901-79950 / 86044 show all
jmaeng-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	99.9088	99.8179	100.0000	81.3161	548	1	548	0	0
jmaeng-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	97.4359	95.0000	100.0000	78.6517	57	3	57	0	0
jmaeng-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	89.9913	81.8038	100.0000	35.7482	517	115	541	0	0
jmaeng-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_51to200	het	89.7959	81.4815	100.0000	97.5207	22	5	3	0	0
jmaeng-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_homopolymer_gt10	*	100.0000	100.0000	100.0000	99.9933	1	0	1	0	0
jmaeng-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_homopolymer_gt10	hetalt	100.0000	100.0000	100.0000	99.9837	1	0	1	0	0
jmaeng-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	96.9945	94.1645	100.0000	38.4968	1065	66	1072	0	0
jmaeng-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_51to200	hetalt	94.9153	90.3226	100.0000	36.0000	196	21	208	0	0
jmaeng-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_11to50	hetalt	97.5450	95.2077	100.0000	30.5361	298	15	298	0	0
jmaeng-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_51to200	hetalt	97.7778	95.6522	100.0000	12.0000	22	1	22	0	0
jmaeng-gatk	INDEL	I1_5	map_l100_m0_e0	hetalt	100.0000	100.0000	100.0000	93.5252	9	0	9	0	0
jmaeng-gatk	INDEL	I1_5	map_l100_m1_e0	hetalt	96.4706	93.1818	100.0000	88.7671	41	3	41	0	0
jmaeng-gatk	INDEL	I1_5	map_l100_m2_e0	hetalt	96.4706	93.1818	100.0000	89.6465	41	3	41	0	0
jmaeng-gatk	INDEL	I1_5	map_l100_m2_e1	hetalt	96.5517	93.3333	100.0000	89.6296	42	3	42	0	0
jmaeng-gatk	INDEL	I1_5	map_l125_m0_e0	hetalt	100.0000	100.0000	100.0000	96.0784	4	0	4	0	0
jmaeng-gatk	INDEL	I1_5	map_l125_m1_e0	hetalt	100.0000	100.0000	100.0000	93.3071	17	0	17	0	0
jmaeng-gatk	INDEL	I1_5	map_l125_m2_e0	hetalt	100.0000	100.0000	100.0000	93.4483	19	0	19	0	0
jmaeng-gatk	INDEL	I1_5	map_l125_m2_e1	hetalt	100.0000	100.0000	100.0000	93.5593	19	0	19	0	0
jmaeng-gatk	INDEL	I1_5	map_l150_m0_e0	hetalt	100.0000	100.0000	100.0000	96.0000	3	0	3	0	0
jmaeng-gatk	INDEL	I1_5	map_l150_m1_e0	hetalt	100.0000	100.0000	100.0000	95.3125	9	0	9	0	0
jmaeng-gatk	INDEL	I1_5	map_l150_m2_e0	hetalt	100.0000	100.0000	100.0000	95.9821	9	0	9	0	0
jmaeng-gatk	INDEL	I1_5	map_l150_m2_e1	hetalt	100.0000	100.0000	100.0000	95.6332	10	0	10	0	0
jmaeng-gatk	INDEL	I1_5	map_l250_m1_e0	hetalt	100.0000	100.0000	100.0000	98.0392	2	0	2	0	0
jmaeng-gatk	INDEL	I1_5	map_l250_m2_e0	hetalt	100.0000	100.0000	100.0000	98.4127	2	0	2	0	0
jmaeng-gatk	INDEL	I1_5	map_l250_m2_e1	hetalt	100.0000	100.0000	100.0000	98.4375	2	0	2	0	0
jmaeng-gatk	INDEL	I1_5	map_siren	hetalt	95.3271	91.0714	100.0000	86.8047	102	10	102	0	0
jmaeng-gatk	INDEL	I1_5	segdup	hetalt	95.6522	91.6667	100.0000	95.9750	44	4	45	0	0
jmaeng-gatk	INDEL	I1_5	tech_badpromoters	*	100.0000	100.0000	100.0000	53.1915	22	0	22	0	0
jmaeng-gatk	INDEL	I1_5	tech_badpromoters	het	100.0000	100.0000	100.0000	42.8571	8	0	8	0	0
jmaeng-gatk	INDEL	I1_5	tech_badpromoters	hetalt	100.0000	100.0000	100.0000	50.0000	1	0	1	0	0
jmaeng-gatk	INDEL	I1_5	tech_badpromoters	homalt	100.0000	100.0000	100.0000	58.0645	13	0	13	0	0
jmaeng-gatk	INDEL	I6_15	HG002complexvar	hetalt	95.0665	90.5969	100.0000	53.0086	1108	115	1148	0	0
jmaeng-gatk	INDEL	I6_15	HG002compoundhet	hetalt	95.7568	91.8590	100.0000	28.4755	7842	695	7882	0	0
jmaeng-gatk	INDEL	I6_15	func_cds	hetalt	85.7143	75.0000	100.0000	0.0000	3	1	3	0	0
jmaeng-gatk	INDEL	I6_15	func_cds	homalt	100.0000	100.0000	100.0000	42.3077	15	0	15	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	92.8210	86.6038	100.0000	44.7917	459	71	477	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	89.0909	80.3279	100.0000	51.0000	49	12	49	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.1453	98.3051	100.0000	74.5985	174	3	174	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	96.3415	92.9412	100.0000	54.5455	79	6	80	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	98.9562	97.9339	100.0000	69.3299	237	5	238	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	99.5885	99.1803	100.0000	71.9258	121	1	121	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	96.0000	92.3077	100.0000	56.2500	48	4	49	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	70.8155	68	0	68	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	93.0781	87.0523	100.0000	43.3735	316	47	329	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_51to200	*	82.0513	69.5652	100.0000	59.4937	64	28	64	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_51to200	hetalt	81.4286	68.6747	100.0000	27.2727	57	26	64	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.1870	98.3871	100.0000	86.9198	61	1	62	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	100.0000	100.0000	100.0000	81.5094	49	0	49	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_gt10	*	100.0000	100.0000	100.0000	99.8691	2	0	2	0	0
jmaeng-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_gt10	hetalt	100.0000	100.0000	100.0000	99.3691	2	0	2	0	0

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