PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecision Frac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
79701-79750 / 86044 show all
ltrigg-rtg2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.0588
10200
ltrigg-rtg2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
75.0000
10100
ltrigg-rtg2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
97.2973
94.7368
100.0000
79.3478
1811900
ltrigg-rtg2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
99.8985
99.7972
100.0000
50.7028
492149100
ltrigg-rtg2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
99.8145
99.6296
100.0000
55.7214
269126700
ltrigg-rtg2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
67.5000
1201300
ltrigg-rtg2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
40.2266
211021100
ltrigg-rtg2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
97.9006
95.8874
100.0000
43.1730
4431943700
ltrigg-rtg2INDELD16_PLUSlowcmp_SimpleRepeat_diTR_11to50homalt
96.4981
93.2331
100.0000
49.1758
3722737000
ltrigg-rtg2INDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10*
98.2456
96.5517
100.0000
71.8750
8438100
ltrigg-rtg2INDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10het
99.0291
98.0769
100.0000
72.5275
5115000
ltrigg-rtg2INDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
67.6471
1201100
ltrigg-rtg2INDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10homalt
95.4545
91.3043
100.0000
72.2222
2122000
ltrigg-rtg2INDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10het
84.2105
72.7273
100.0000
96.0610
32123100
ltrigg-rtg2INDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10homalt
84.6154
73.3333
100.0000
94.6602
1141100
ltrigg-rtg2INDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50*
99.0354
98.0892
100.0000
53.5604
154315000
ltrigg-rtg2INDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50het
99.1736
98.3607
100.0000
67.0588
6015600
ltrigg-rtg2INDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50hetalt
99.0099
98.0392
100.0000
32.0000
5015100
ltrigg-rtg2INDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50homalt
98.8764
97.7778
100.0000
44.8718
4414300
ltrigg-rtg2INDELD16_PLUSlowcmp_SimpleRepeat_triTR_51to200hetalt
93.6170
88.0000
100.0000
26.6667
2232200
ltrigg-rtg2INDELD16_PLUSlowcmp_SimpleRepeat_triTR_51to200homalt
96.0000
92.3077
100.0000
29.4118
1211200
ltrigg-rtg2INDELD16_PLUSmap_l100_m0_e0hetalt
85.7143
75.0000
100.0000
86.3636
31300
ltrigg-rtg2INDELD16_PLUSmap_l100_m0_e0homalt
88.8889
80.0000
100.0000
90.0000
41400
ltrigg-rtg2INDELD16_PLUSmap_l100_m1_e0hetalt
81.8182
69.2308
100.0000
72.5806
1881700
ltrigg-rtg2INDELD16_PLUSmap_l100_m1_e0homalt
84.6154
73.3333
100.0000
85.8824
1141200
jmaeng-gatkINDELD16_PLUSmap_l250_m2_e0homalt
100.0000
100.0000
100.0000
98.3607
10100
jmaeng-gatkINDELD16_PLUSmap_l250_m2_e1hetalt
100.0000
100.0000
100.0000
94.4444
10100
jmaeng-gatkINDELD16_PLUSmap_l250_m2_e1homalt
100.0000
100.0000
100.0000
98.3607
10100
jmaeng-gatkINDELD16_PLUSmap_sirenhetalt
93.1034
87.0968
100.0000
81.6456
2742900
jmaeng-gatkINDELD16_PLUSsegduphetalt
87.5000
77.7778
100.0000
92.8571
72900
jmaeng-gatkINDELD16_PLUSsegduphomalt
100.0000
100.0000
100.0000
96.6759
1201200
jmaeng-gatkINDELD16_PLUStech_badpromoters*
100.0000
100.0000
100.0000
33.3333
40400
jmaeng-gatkINDELD16_PLUStech_badpromotershet
100.0000
100.0000
100.0000
0.0000
40400
jmaeng-gatkINDELD1_5decoy*
100.0000
100.0000
100.0000
99.9760
40400
jmaeng-gatkINDELD1_5decoyhet
100.0000
100.0000
100.0000
99.9864
20200
jmaeng-gatkINDELD1_5decoyhetalt
100.0000
100.0000
100.0000
99.7050
10100
jmaeng-gatkINDELD1_5decoyhomalt
100.0000
100.0000
100.0000
99.9403
10100
jmaeng-gatkINDELD1_5func_cdshomalt
100.0000
100.0000
100.0000
33.9286
7407400
jmaeng-gatkINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
98.8718
1101100
jmaeng-gatkINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.7402
80800
jmaeng-gatkINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.9697
10100
jmaeng-gatkINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.3485
20200
jmaeng-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
88.7097
79.7101
100.0000
53.3898
55145500
jmaeng-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
98.9213
1001000
jmaeng-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.8353
70700
jmaeng-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.4286
10100
jmaeng-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.3289
20200
jmaeng-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
99.9238
99.8478
100.0000
80.6261
656165600
jmaeng-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.9592
10100
jmaeng-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.0588
10100