PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecision Frac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
79351-79400 / 86044 show all
ltrigg-rtg1INDELI6_15tech_badpromoters*
100.0000
100.0000
100.0000
56.6667
1301300
ltrigg-rtg1INDELI6_15tech_badpromotershet
100.0000
100.0000
100.0000
58.8235
70700
ltrigg-rtg1INDELI6_15tech_badpromotershetalt
100.0000
100.0000
100.0000
40.0000
30300
ltrigg-rtg1INDELI6_15tech_badpromotershomalt
100.0000
100.0000
100.0000
62.5000
30300
ltrigg-rtg1SNP*HG002compoundhethetalt
99.8257
99.6520
100.0000
21.3175
859386000
ltrigg-rtg1SNP*func_cdshetalt
100.0000
100.0000
100.0000
58.3333
1001000
ltrigg-rtg1SNP*func_cdshomalt
99.9857
99.9713
100.0000
22.0795
69772697700
ltrigg-rtg1SNP*lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
100.0000
92.3077
00100
ltrigg-rtg1SNP*lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
96.0000
92.3077
100.0000
77.1930
1211300
ltrigg-rtg1SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
99.7820
99.5649
100.0000
51.8715
16027163300
ltrigg-rtg1SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
87.5000
10100
ltrigg-rtg1SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
99.9333
99.8668
100.0000
53.2144
22493230700
ltrigg-rtg1SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
66.6667
10100
ltrigg-rtg1SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
99.9638
99.9277
100.0000
58.3062
13821140800
ltrigg-rtg1SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
94.2308
89.0909
100.0000
89.1403
98129600
ltrigg-rtg1SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
70.0000
20300
ltrigg-rtg1SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
98.4517
96.9506
100.0000
80.4511
9222988400
ltrigg-rtg1SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
70.0000
20300
ltrigg-rtg1SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
98.9324
97.8873
100.0000
78.7726
8341879900
ltrigg-rtg1SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
90.9091
30400
ltrigg-rtg1SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
99.5123
99.0294
100.0000
77.4811
387738389600
ltrigg-rtg1SNP*lowcmp_SimpleRepeat_diTR_11to50hetalt
100.0000
100.0000
100.0000
93.3333
10100
ltrigg-rtg1SNP*lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
100.0000
0.0000
00100
ltrigg-rtg1SNP*lowcmp_SimpleRepeat_diTR_51to200homalt
88.8889
80.0000
100.0000
93.1818
1231200
ltrigg-rtg1SNP*lowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
66.6667
50500
ltrigg-rtg1SNP*lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.8931
99.7865
100.0000
53.0439
607513607800
ltrigg-rtg1SNP*lowcmp_SimpleRepeat_quadTR_11to50hetalt
100.0000
100.0000
100.0000
72.2222
50500
ltrigg-rtg1SNP*lowcmp_SimpleRepeat_triTR_51to200*
94.1176
88.8889
100.0000
95.5975
81700
ltrigg-rtg1SNP*lowcmp_SimpleRepeat_triTR_51to200het
100.0000
100.0000
100.0000
95.6835
70600
ltrigg-rtg1SNP*lowcmp_SimpleRepeat_triTR_51to200homalt
66.6667
50.0000
100.0000
95.0000
11100
ltrigg-rtg1SNP*map_l100_m0_e0hetalt
100.0000
100.0000
100.0000
63.6364
1601600
ltrigg-rtg1SNP*map_l100_m1_e0hetalt
100.0000
100.0000
100.0000
64.0351
4104100
ltrigg-rtg1SNP*map_l100_m2_e0hetalt
100.0000
100.0000
100.0000
65.8537
4204200
ltrigg-rtg1SNP*map_l100_m2_e1hetalt
100.0000
100.0000
100.0000
65.3226
4304300
ltrigg-rtg1SNP*map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
71.8750
90900
ltrigg-rtg1SNP*map_l125_m1_e0hetalt
100.0000
100.0000
100.0000
63.4146
3003000
ltrigg-rtg1SNP*map_l125_m2_e0hetalt
100.0000
100.0000
100.0000
67.3913
3003000
ltrigg-rtg1SNP*map_l125_m2_e1hetalt
100.0000
100.0000
100.0000
67.3913
3003000
ltrigg-rtg1SNP*map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
86.3636
30300
ltrigg-rtg1SNP*map_l150_m1_e0hetalt
100.0000
100.0000
100.0000
68.7500
2002000
ltrigg-rtg1SNP*map_l150_m2_e0hetalt
100.0000
100.0000
100.0000
70.5882
2002000
ltrigg-rtg1SNP*map_l150_m2_e1hetalt
100.0000
100.0000
100.0000
71.0145
2002000
ltrigg-rtg1SNP*map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
85.1852
40400
ltrigg-rtg1SNP*map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
83.3333
50500
ltrigg-rtg1SNP*map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
83.3333
50500
ltrigg-rtg1SNP*segduphetalt
100.0000
100.0000
100.0000
96.9027
70700
ltrigg-rtg1SNP*tech_badpromotershomalt
99.3711
98.7500
100.0000
48.7013
7917900
ltrigg-rtg1SNPtiHG002compoundhethetalt
99.9136
99.8273
100.0000
20.9016
578157900
ltrigg-rtg1SNPtifunc_cdshetalt
100.0000
100.0000
100.0000
46.6667
80800
ltrigg-rtg1SNPtifunc_cdshomalt
99.9810
99.9621
100.0000
20.7187
52732527300