PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecision Frac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
79001-79050 / 86044 show all
ltrigg-rtg2INDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.9942
10100
ltrigg-rtg2INDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.9910
10100
ltrigg-rtg2INDELI1_5lowcmp_SimpleRepeat_quadTR_51to200homalt
100.0000
100.0000
100.0000
96.0000
10200
ltrigg-rtg2INDELI1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
95.4545
91.3043
100.0000
37.1429
2122200
ltrigg-rtg2INDELI1_5map_l100_m0_e0hetalt
100.0000
100.0000
100.0000
96.1538
901000
ltrigg-rtg2INDELI1_5map_l100_m1_e0hetalt
93.9759
88.6364
100.0000
93.3227
3954200
ltrigg-rtg2INDELI1_5map_l100_m2_e0hetalt
93.9759
88.6364
100.0000
93.8053
3954200
ltrigg-rtg2INDELI1_5map_l100_m2_e1hetalt
94.1176
88.8889
100.0000
93.7591
4054300
ltrigg-rtg2INDELI1_5map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
97.3822
40500
ltrigg-rtg2INDELI1_5map_l125_m1_e0hetalt
100.0000
100.0000
100.0000
95.4654
1701900
ltrigg-rtg2INDELI1_5map_l125_m2_e0hetalt
97.2973
94.7368
100.0000
95.7627
1812000
ltrigg-rtg2INDELI1_5map_l125_m2_e1hetalt
97.2973
94.7368
100.0000
95.7983
1812000
ltrigg-rtg2INDELI1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
97.3510
30400
ltrigg-rtg2INDELI1_5map_l150_m0_e0homalt
99.2481
98.5075
100.0000
83.5476
6616400
ltrigg-rtg2INDELI1_5map_l150_m1_e0hetalt
100.0000
100.0000
100.0000
96.7320
901000
ltrigg-rtg2INDELI1_5map_l150_m2_e0hetalt
100.0000
100.0000
100.0000
97.1591
901000
ltrigg-rtg2INDELI1_5map_l150_m2_e1hetalt
100.0000
100.0000
100.0000
96.9274
1001100
ltrigg-rtg2INDELI1_5map_l250_m0_e0homalt
100.0000
100.0000
100.0000
94.1860
901000
ltrigg-rtg2INDELI1_5map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
98.9011
20200
ltrigg-rtg2INDELI1_5map_l250_m1_e0homalt
98.8506
97.7273
100.0000
91.7625
4314300
ltrigg-rtg2INDELI1_5map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
99.0868
20200
ltrigg-rtg2INDELI1_5map_l250_m2_e0homalt
98.8764
97.7778
100.0000
93.0599
4414400
ltrigg-rtg2INDELI1_5map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
99.0991
20200
ltrigg-rtg2INDELI1_5map_l250_m2_e1homalt
98.9011
97.8261
100.0000
93.1087
4514500
ltrigg-rtg2INDELI1_5map_sirenhetalt
98.1818
96.4286
100.0000
92.1300
108410900
ltrigg-rtg2INDELI1_5segduphetalt
100.0000
100.0000
100.0000
96.8447
4805200
ltrigg-rtg2INDELI1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
50.0000
10100
ltrigg-rtg2INDELI1_5tech_badpromotershomalt
100.0000
100.0000
100.0000
56.6667
1301300
ltrigg-rtg2INDELI6_15func_cds*
98.8235
97.6744
100.0000
33.3333
4214200
ltrigg-rtg2INDELI6_15func_cdshet
100.0000
100.0000
100.0000
34.2857
2402300
ltrigg-rtg2INDELI6_15func_cdshetalt
85.7143
75.0000
100.0000
42.8571
31400
ltrigg-rtg2INDELI6_15func_cdshomalt
100.0000
100.0000
100.0000
28.5714
1501500
ltrigg-rtg2INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
94.8276
90.1639
100.0000
55.6452
5565500
ltrigg-rtg2INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
62.1053
3603600
ltrigg-rtg2INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
97.5904
95.2941
100.0000
62.7193
8148500
ltrigg-rtg2INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
60.3376
9209400
ltrigg-rtg2INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
99.3763
98.7603
100.0000
63.6228
239324300
ltrigg-rtg2INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
99.1736
98.3607
100.0000
64.2643
120211900
ltrigg-rtg2INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
99.0291
98.0769
100.0000
64.9682
5115500
ltrigg-rtg2INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
61.2360
6806900
ltrigg-rtg2INDELI6_15lowcmp_SimpleRepeat_diTR_51to200het
80.0000
66.6667
100.0000
85.3659
63600
ltrigg-rtg2INDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10het
98.3607
96.7742
100.0000
82.2823
6025900
ltrigg-rtg2INDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.8529
20200
ltrigg-rtg2INDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.6721
20200
ltrigg-rtg2INDELI6_15lowcmp_SimpleRepeat_triTR_11to50hetalt
99.5763
99.1561
100.0000
39.9497
235223900
ltrigg-rtg2INDELI6_15lowcmp_SimpleRepeat_triTR_11to50homalt
100.0000
100.0000
100.0000
52.5000
5905700
ltrigg-rtg2INDELI6_15lowcmp_SimpleRepeat_triTR_51to200*
91.6667
84.6154
100.0000
70.2703
1121100
ltrigg-rtg2INDELI6_15lowcmp_SimpleRepeat_triTR_51to200het
100.0000
100.0000
100.0000
92.8571
10100
ltrigg-rtg2INDELI6_15lowcmp_SimpleRepeat_triTR_51to200hetalt
90.9091
83.3333
100.0000
56.5217
1021000
ltrigg-rtg2INDELI6_15map_l100_m0_e0*
90.0000
81.8182
100.0000
86.5672
2762700