PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt

« 1 2 ... 1575 1576 1577 1578 1579 1580 1581 1582 1583 ... 1720 1721 » 78901-78950 / 86044 show all
ltrigg-rtg2	INDEL	D6_15	map_l125_m2_e0	het	97.8417	95.7746	100.0000	86.7063	68	3	67	0	0
ltrigg-rtg2	INDEL	D6_15	map_l125_m2_e0	hetalt	97.2973	94.7368	100.0000	88.5135	18	1	17	0	0
ltrigg-rtg2	INDEL	D6_15	map_l125_m2_e0	homalt	98.5915	97.2222	100.0000	81.5642	35	1	33	0	0
ltrigg-rtg2	INDEL	D6_15	map_l125_m2_e1	*	97.6000	95.3125	100.0000	86.1340	122	6	118	0	0
ltrigg-rtg2	INDEL	D6_15	map_l125_m2_e1	het	97.8417	95.7746	100.0000	86.9650	68	3	67	0	0
ltrigg-rtg2	INDEL	D6_15	map_l125_m2_e1	hetalt	94.7368	90.0000	100.0000	88.8158	18	2	17	0	0
ltrigg-rtg2	INDEL	D6_15	map_l125_m2_e1	homalt	98.6301	97.2973	100.0000	81.6216	36	1	34	0	0
ltrigg-rtg2	INDEL	D6_15	map_l150_m0_e0	*	100.0000	100.0000	100.0000	90.6158	32	0	32	0	0
ltrigg-rtg2	INDEL	D6_15	map_l150_m0_e0	het	100.0000	100.0000	100.0000	90.1961	20	0	20	0	0
ltrigg-rtg2	INDEL	D6_15	map_l150_m0_e0	hetalt	100.0000	100.0000	100.0000	92.0635	5	0	5	0	0
ltrigg-rtg2	INDEL	D6_15	map_l150_m0_e0	homalt	100.0000	100.0000	100.0000	90.5405	7	0	7	0	0
ltrigg-rtg2	INDEL	D6_15	map_l150_m1_e0	*	99.3103	98.6301	100.0000	87.8840	72	1	71	0	0
ltrigg-rtg2	INDEL	D6_15	map_l150_m1_e0	het	100.0000	100.0000	100.0000	89.0141	39	0	39	0	0
ltrigg-rtg2	INDEL	D6_15	map_l150_m1_e0	hetalt	100.0000	100.0000	100.0000	92.0000	8	0	8	0	0
ltrigg-rtg2	INDEL	D6_15	map_l150_m1_e0	homalt	98.0392	96.1538	100.0000	81.6794	25	1	24	0	0
ltrigg-rtg2	INDEL	D6_15	map_l150_m2_e0	*	99.3865	98.7805	100.0000	87.6755	81	1	79	0	0
ltrigg-rtg2	INDEL	D6_15	map_l150_m2_e0	het	100.0000	100.0000	100.0000	88.2507	46	0	45	0	0
ltrigg-rtg2	INDEL	D6_15	map_l150_m2_e0	hetalt	100.0000	100.0000	100.0000	92.6606	8	0	8	0	0
ltrigg-rtg2	INDEL	D6_15	map_l150_m2_e0	homalt	98.1818	96.4286	100.0000	82.5503	27	1	26	0	0
ltrigg-rtg2	INDEL	D6_15	map_l150_m2_e1	*	98.8095	97.6471	100.0000	87.6900	83	2	81	0	0
ltrigg-rtg2	INDEL	D6_15	map_l150_m2_e1	het	100.0000	100.0000	100.0000	88.2653	47	0	46	0	0
ltrigg-rtg2	INDEL	D6_15	map_l150_m2_e1	hetalt	94.1176	88.8889	100.0000	92.8571	8	1	8	0	0
ltrigg-rtg2	INDEL	D6_15	map_l150_m2_e1	homalt	98.2456	96.5517	100.0000	82.4675	28	1	27	0	0
ltrigg-rtg2	INDEL	D6_15	map_l250_m0_e0	*	100.0000	100.0000	100.0000	96.5909	6	0	6	0	0
ltrigg-rtg2	INDEL	D6_15	map_l250_m0_e0	het	100.0000	100.0000	100.0000	96.0784	4	0	4	0	0
ltrigg-rtg2	INDEL	D6_15	map_l250_m0_e0	homalt	100.0000	100.0000	100.0000	94.7368	2	0	2	0	0
ltrigg-rtg2	INDEL	D6_15	map_l250_m1_e0	*	100.0000	100.0000	100.0000	94.1558	18	0	18	0	0
ltrigg-rtg2	INDEL	D6_15	map_l250_m1_e0	het	100.0000	100.0000	100.0000	94.1176	11	0	11	0	0
ltrigg-rtg2	INDEL	D6_15	map_l250_m1_e0	hetalt	100.0000	100.0000	100.0000	96.5517	2	0	2	0	0
ltrigg-rtg2	INDEL	D6_15	map_l250_m1_e0	homalt	100.0000	100.0000	100.0000	92.0635	5	0	5	0	0
ltrigg-rtg2	INDEL	D6_15	map_l250_m2_e0	*	100.0000	100.0000	100.0000	93.4659	22	0	23	0	0
ltrigg-rtg2	INDEL	D6_15	map_l250_m2_e0	het	100.0000	100.0000	100.0000	92.9245	14	0	15	0	0
ltrigg-rtg2	INDEL	D6_15	map_l250_m2_e0	hetalt	100.0000	100.0000	100.0000	96.9231	2	0	2	0	0
ltrigg-rtg2	INDEL	D6_15	map_l250_m2_e0	homalt	100.0000	100.0000	100.0000	92.0000	6	0	6	0	0
ltrigg-rtg2	INDEL	D6_15	map_l250_m2_e1	*	100.0000	100.0000	100.0000	93.6639	22	0	23	0	0
ltrigg-rtg2	INDEL	D6_15	map_l250_m2_e1	het	100.0000	100.0000	100.0000	93.1507	14	0	15	0	0
ltrigg-rtg2	INDEL	D6_15	map_l250_m2_e1	hetalt	100.0000	100.0000	100.0000	96.9697	2	0	2	0	0
ltrigg-rtg2	INDEL	D6_15	map_l250_m2_e1	homalt	100.0000	100.0000	100.0000	92.3077	6	0	6	0	0
ltrigg-rtg2	INDEL	D6_15	map_siren	hetalt	96.8750	93.9394	100.0000	80.5139	93	6	91	0	0
ltrigg-rtg2	INDEL	D6_15	segdup	hetalt	96.8421	93.8776	100.0000	90.1468	46	3	47	0	0
ltrigg-rtg2	INDEL	D6_15	segdup	homalt	98.9899	98.0000	100.0000	89.5966	49	1	49	0	0
ltrigg-rtg2	INDEL	D6_15	tech_badpromoters	*	100.0000	100.0000	100.0000	50.0000	17	0	17	0	0
ltrigg-rtg2	INDEL	D6_15	tech_badpromoters	het	100.0000	100.0000	100.0000	44.4444	10	0	10	0	0
ltrigg-rtg2	INDEL	D6_15	tech_badpromoters	hetalt	100.0000	100.0000	100.0000	66.6667	1	0	1	0	0
ltrigg-rtg2	INDEL	D6_15	tech_badpromoters	homalt	100.0000	100.0000	100.0000	53.8462	6	0	6	0	0
ltrigg-rtg2	INDEL	I16_PLUS	func_cds	*	90.9091	83.3333	100.0000	50.0000	10	2	10	0	0
ltrigg-rtg2	INDEL	I16_PLUS	func_cds	het	94.1176	88.8889	100.0000	42.8571	8	1	8	0	0
ltrigg-rtg2	INDEL	I16_PLUS	func_cds	homalt	100.0000	100.0000	100.0000	66.6667	2	0	2	0	0
ltrigg-rtg2	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	85.7143	75.0000	100.0000	63.1068	81	27	76	0	0
ltrigg-rtg2	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	95.9064	92.1348	100.0000	61.9512	82	7	78	0	0

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge