PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecision Frac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
78801-78850 / 86044 show all
ltrigg-rtg2INDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.2857
20200
ltrigg-rtg2INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
98.8235
97.6744
100.0000
54.6263
252625500
ltrigg-rtg2INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.0557
1001000
ltrigg-rtg2INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
99.0305
70700
ltrigg-rtg2INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
98.3051
10100
ltrigg-rtg2INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.2806
20200
ltrigg-rtg2INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
99.2620
98.5348
100.0000
70.7344
538853000
ltrigg-rtg2INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
99.4550
98.9160
100.0000
75.9184
365435400
ltrigg-rtg2INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
96.8750
10100
ltrigg-rtg2INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
96.1538
10100
ltrigg-rtg2INDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.7686
99.5382
100.0000
50.6863
10131471009500
ltrigg-rtg2INDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.9981
10200
ltrigg-rtg2INDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.9884
10200
ltrigg-rtg2INDELD1_5lowcmp_SimpleRepeat_quadTR_11to50homalt
99.6029
99.2089
100.0000
43.0390
363729362500
ltrigg-rtg2INDELD1_5lowcmp_SimpleRepeat_triTR_11to50homalt
99.8494
99.6992
100.0000
33.0461
13264132100
ltrigg-rtg2INDELD1_5lowcmp_SimpleRepeat_triTR_51to200*
96.5517
93.3333
100.0000
56.3636
7057200
ltrigg-rtg2INDELD1_5lowcmp_SimpleRepeat_triTR_51to200het
100.0000
100.0000
100.0000
81.9277
1301500
ltrigg-rtg2INDELD1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
94.6237
89.7959
100.0000
27.8689
4454400
ltrigg-rtg2INDELD1_5lowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
38.0952
1301300
ltrigg-rtg2INDELD1_5map_l100_m0_e0hetalt
92.3077
85.7143
100.0000
95.7198
1221100
ltrigg-rtg2INDELD1_5map_l100_m1_e0hetalt
90.6977
82.9787
100.0000
93.6027
3983800
ltrigg-rtg2INDELD1_5map_l100_m2_e0hetalt
90.9091
83.3333
100.0000
93.7600
4083900
ltrigg-rtg2INDELD1_5map_l100_m2_e1hetalt
91.4894
84.3137
100.0000
93.4066
4384200
ltrigg-rtg2INDELD1_5map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
98.3607
30300
ltrigg-rtg2INDELD1_5map_l125_m1_e0hetalt
91.6667
84.6154
100.0000
97.2973
1121000
ltrigg-rtg2INDELD1_5map_l125_m2_e0hetalt
88.8889
80.0000
100.0000
97.2906
1231100
ltrigg-rtg2INDELD1_5map_l125_m2_e1hetalt
88.8889
80.0000
100.0000
97.3366
1231100
ltrigg-rtg2INDELD1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
98.6111
20200
ltrigg-rtg2INDELD1_5map_l150_m1_e0hetalt
83.3333
71.4286
100.0000
98.6348
52400
ltrigg-rtg2INDELD1_5map_l150_m2_e0hetalt
83.3333
71.4286
100.0000
98.7539
52400
ltrigg-rtg2INDELD1_5map_l150_m2_e1hetalt
85.7143
75.0000
100.0000
98.4756
62500
ltrigg-rtg2INDELD1_5map_l250_m0_e0*
93.0233
86.9565
100.0000
94.9068
4064100
ltrigg-rtg2INDELD1_5map_l250_m0_e0het
93.5484
87.8788
100.0000
93.2127
2943000
ltrigg-rtg2INDELD1_5map_l250_m0_e0homalt
91.6667
84.6154
100.0000
96.0145
1121100
ltrigg-rtg2INDELD1_5map_l250_m1_e0*
96.6767
93.5673
100.0000
90.7736
1601116100
ltrigg-rtg2INDELD1_5map_l250_m1_e0het
96.2617
92.7928
100.0000
89.5210
103810500
ltrigg-rtg2INDELD1_5map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
98.8636
30200
ltrigg-rtg2INDELD1_5map_l250_m1_e0homalt
97.2973
94.7368
100.0000
90.4762
5435400
ltrigg-rtg2INDELD1_5map_l250_m2_e0*
96.9188
94.0217
100.0000
91.5122
1731117400
ltrigg-rtg2INDELD1_5map_l250_m2_e0het
96.5812
93.3884
100.0000
90.2625
113811500
ltrigg-rtg2INDELD1_5map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
99.0000
30200
ltrigg-rtg2INDELD1_5map_l250_m2_e0homalt
97.4359
95.0000
100.0000
91.4798
5735700
ltrigg-rtg2INDELD1_5map_l250_m2_e1*
96.9359
94.0541
100.0000
91.6547
1741117500
ltrigg-rtg2INDELD1_5map_l250_m2_e1het
96.6102
93.4426
100.0000
90.3654
114811600
ltrigg-rtg2INDELD1_5map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
99.0244
30200
ltrigg-rtg2INDELD1_5map_l250_m2_e1homalt
97.4359
95.0000
100.0000
91.7151
5735700
ltrigg-rtg2INDELD1_5segduphetalt
100.0000
100.0000
100.0000
96.1705
5205300
ltrigg-rtg2INDELD1_5segduphomalt
99.8605
99.7214
100.0000
92.9966
358135500
ltrigg-rtg2INDELD1_5segdupwithalt*
100.0000
100.0000
100.0000
99.9917
10100
ltrigg-rtg2INDELD1_5segdupwithalthet
100.0000
100.0000
100.0000
99.9858
10100