PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecision Frac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
78501-78550 / 86044 show all
ltrigg-rtg1INDELD16_PLUSsegduphomalt
100.0000
100.0000
100.0000
92.4528
1201200
ltrigg-rtg1INDELD16_PLUStech_badpromoters*
100.0000
100.0000
100.0000
33.3333
40400
ltrigg-rtg1INDELD16_PLUStech_badpromotershet
100.0000
100.0000
100.0000
0.0000
40400
ltrigg-rtg1INDELD1_5decoy*
100.0000
100.0000
100.0000
99.8672
40600
ltrigg-rtg1INDELD1_5decoyhet
100.0000
100.0000
100.0000
99.8566
20400
ltrigg-rtg1INDELD1_5decoyhetalt
100.0000
100.0000
100.0000
99.6364
10100
ltrigg-rtg1INDELD1_5decoyhomalt
100.0000
100.0000
100.0000
99.9312
10100
ltrigg-rtg1INDELD1_5func_cdshomalt
99.3197
98.6486
100.0000
23.1579
7317300
ltrigg-rtg1INDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.0265
1101100
ltrigg-rtg1INDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.8620
80800
ltrigg-rtg1INDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
98.3607
10100
ltrigg-rtg1INDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.4536
20200
ltrigg-rtg1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
95.4545
91.3043
100.0000
69.3396
6366500
ltrigg-rtg1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
98.8235
97.6744
100.0000
58.1549
252625400
ltrigg-rtg1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.0868
1001000
ltrigg-rtg1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.9614
70700
ltrigg-rtg1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
98.2456
10100
ltrigg-rtg1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.4505
20200
ltrigg-rtg1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
99.4475
98.9011
100.0000
72.3149
540653100
ltrigg-rtg1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
99.7283
99.4580
100.0000
77.2087
367235600
ltrigg-rtg1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.2973
10100
ltrigg-rtg1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
96.6667
10100
ltrigg-rtg1INDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.9981
10200
ltrigg-rtg1INDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.9876
10200
ltrigg-rtg1INDELD1_5lowcmp_SimpleRepeat_triTR_11to50homalt
99.9248
99.8496
100.0000
34.3750
13282132300
ltrigg-rtg1INDELD1_5lowcmp_SimpleRepeat_triTR_51to200*
97.2603
94.6667
100.0000
64.9038
7147300
ltrigg-rtg1INDELD1_5lowcmp_SimpleRepeat_triTR_51to200het
96.0000
92.3077
100.0000
88.7097
1211400
ltrigg-rtg1INDELD1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
96.8421
93.8776
100.0000
24.5902
4634600
ltrigg-rtg1INDELD1_5lowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
43.4783
1301300
ltrigg-rtg1INDELD1_5map_l100_m0_e0hetalt
92.3077
85.7143
100.0000
95.6522
1221100
ltrigg-rtg1INDELD1_5map_l100_m1_e0hetalt
89.4118
80.8511
100.0000
93.5201
3893700
ltrigg-rtg1INDELD1_5map_l100_m2_e0hetalt
89.6552
81.2500
100.0000
93.6982
3993800
ltrigg-rtg1INDELD1_5map_l100_m2_e1hetalt
90.3226
82.3529
100.0000
93.2039
4294200
ltrigg-rtg1INDELD1_5map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
98.3516
30300
ltrigg-rtg1INDELD1_5map_l125_m1_e0hetalt
91.6667
84.6154
100.0000
97.1671
1121000
ltrigg-rtg1INDELD1_5map_l125_m2_e0hetalt
88.8889
80.0000
100.0000
97.1503
1231100
ltrigg-rtg1INDELD1_5map_l125_m2_e1hetalt
88.8889
80.0000
100.0000
97.2010
1231100
ltrigg-rtg1INDELD1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
98.6207
20200
ltrigg-rtg1INDELD1_5map_l150_m1_e0hetalt
83.3333
71.4286
100.0000
98.5765
52400
ltrigg-rtg1INDELD1_5map_l150_m2_e0hetalt
83.3333
71.4286
100.0000
98.6971
52400
ltrigg-rtg1INDELD1_5map_l150_m2_e1hetalt
85.7143
75.0000
100.0000
98.4076
62500
ltrigg-rtg1INDELD1_5map_l250_m0_e0*
94.2529
89.1304
100.0000
95.2596
4154200
ltrigg-rtg1INDELD1_5map_l250_m0_e0het
91.8033
84.8485
100.0000
92.3483
2852900
ltrigg-rtg1INDELD1_5map_l250_m0_e0homalt
100.0000
100.0000
100.0000
96.9194
1301300
ltrigg-rtg1INDELD1_5map_l250_m1_e0*
95.4128
91.2281
100.0000
91.6132
1561515700
ltrigg-rtg1INDELD1_5map_l250_m1_e0het
92.7536
86.4865
100.0000
88.6179
96159800
ltrigg-rtg1INDELD1_5map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
98.8235
30200
ltrigg-rtg1INDELD1_5map_l250_m1_e0homalt
100.0000
100.0000
100.0000
93.2224
5705700
ltrigg-rtg1INDELD1_5map_l250_m2_e0*
95.7507
91.8478
100.0000
92.2161
1691517000
ltrigg-rtg1INDELD1_5map_l250_m2_e0het
93.3921
87.6033
100.0000
89.4839
1061510800