PrecisionFDA
Truth Challenge
Engage and improve DNA test results with our community challenges
Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
77151-77200 / 86044 show all | |||||||||||||||
| gduggal-bwafb | INDEL | I1_5 | map_l250_m1_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 97.7273 | 2 | 0 | 2 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I1_5 | map_l250_m2_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 98.1651 | 2 | 0 | 2 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I1_5 | map_l250_m2_e1 | hetalt | 100.0000 | 100.0000 | 100.0000 | 98.1651 | 2 | 0 | 2 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I1_5 | map_siren | hetalt | 90.7317 | 83.0357 | 100.0000 | 92.3729 | 93 | 19 | 54 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I1_5 | tech_badpromoters | * | 100.0000 | 100.0000 | 100.0000 | 53.1915 | 22 | 0 | 22 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I1_5 | tech_badpromoters | het | 100.0000 | 100.0000 | 100.0000 | 33.3333 | 8 | 0 | 8 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I1_5 | tech_badpromoters | hetalt | 100.0000 | 100.0000 | 100.0000 | 75.0000 | 1 | 0 | 1 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I1_5 | tech_badpromoters | homalt | 100.0000 | 100.0000 | 100.0000 | 58.0645 | 13 | 0 | 13 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | func_cds | het | 90.9091 | 83.3333 | 100.0000 | 40.0000 | 20 | 4 | 21 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | func_cds | homalt | 96.5517 | 93.3333 | 100.0000 | 26.3158 | 14 | 1 | 14 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | lowcmp_SimpleRepeat_diTR_51to200 | * | 32.7273 | 19.5652 | 100.0000 | 62.2222 | 18 | 74 | 17 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | lowcmp_SimpleRepeat_diTR_51to200 | hetalt | 34.0000 | 20.4819 | 100.0000 | 32.0000 | 17 | 66 | 17 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | lowcmp_SimpleRepeat_quadTR_51to200 | hetalt | 63.3484 | 46.3576 | 100.0000 | 27.0833 | 70 | 81 | 70 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | lowcmp_SimpleRepeat_triTR_51to200 | * | 70.0000 | 53.8462 | 100.0000 | 53.8462 | 7 | 6 | 6 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | lowcmp_SimpleRepeat_triTR_51to200 | hetalt | 66.6667 | 50.0000 | 100.0000 | 14.2857 | 6 | 6 | 6 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l100_m0_e0 | het | 78.5714 | 64.7059 | 100.0000 | 88.3929 | 11 | 6 | 13 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l100_m0_e0 | hetalt | 85.7143 | 75.0000 | 100.0000 | 92.3077 | 3 | 1 | 1 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l100_m1_e0 | het | 83.1683 | 71.1864 | 100.0000 | 81.5094 | 42 | 17 | 49 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l100_m1_e0 | hetalt | 84.2105 | 72.7273 | 100.0000 | 80.0000 | 16 | 6 | 7 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l100_m2_e0 | het | 82.6923 | 70.4918 | 100.0000 | 82.5175 | 43 | 18 | 50 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l100_m2_e0 | hetalt | 84.2105 | 72.7273 | 100.0000 | 80.5556 | 16 | 6 | 7 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l100_m2_e1 | het | 82.6923 | 70.4918 | 100.0000 | 82.8179 | 43 | 18 | 50 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l100_m2_e1 | hetalt | 84.2105 | 72.7273 | 100.0000 | 81.0811 | 16 | 6 | 7 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l125_m0_e0 | het | 71.4286 | 55.5556 | 100.0000 | 93.7500 | 5 | 4 | 5 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l125_m1_e0 | het | 72.3404 | 56.6667 | 100.0000 | 88.3721 | 17 | 13 | 20 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l125_m1_e0 | hetalt | 93.3333 | 87.5000 | 100.0000 | 77.7778 | 7 | 1 | 4 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l125_m2_e0 | het | 72.3404 | 56.6667 | 100.0000 | 90.0498 | 17 | 13 | 20 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l125_m2_e0 | hetalt | 93.3333 | 87.5000 | 100.0000 | 80.9524 | 7 | 1 | 4 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l125_m2_e1 | het | 72.3404 | 56.6667 | 100.0000 | 90.3382 | 17 | 13 | 20 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l125_m2_e1 | hetalt | 93.3333 | 87.5000 | 100.0000 | 80.9524 | 7 | 1 | 4 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l150_m0_e0 | * | 85.7143 | 75.0000 | 100.0000 | 94.8718 | 6 | 2 | 6 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l150_m0_e0 | het | 66.6667 | 50.0000 | 100.0000 | 97.1429 | 2 | 2 | 2 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l150_m0_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 90.0000 | 4 | 0 | 4 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l150_m1_e0 | het | 75.0000 | 60.0000 | 100.0000 | 92.8058 | 9 | 6 | 10 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l150_m1_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 84.6154 | 3 | 0 | 2 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l150_m2_e0 | het | 75.0000 | 60.0000 | 100.0000 | 93.6306 | 9 | 6 | 10 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l150_m2_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 88.2353 | 3 | 0 | 2 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l150_m2_e1 | het | 76.9231 | 62.5000 | 100.0000 | 93.3333 | 10 | 6 | 11 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l150_m2_e1 | hetalt | 100.0000 | 100.0000 | 100.0000 | 88.2353 | 3 | 0 | 2 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l250_m0_e0 | * | 100.0000 | 100.0000 | 100.0000 | 98.4127 | 1 | 0 | 1 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l250_m0_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 96.0000 | 1 | 0 | 1 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l250_m1_e0 | het | 66.6667 | 50.0000 | 100.0000 | 97.5000 | 2 | 2 | 2 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l250_m2_e0 | het | 75.0000 | 60.0000 | 100.0000 | 96.5909 | 3 | 2 | 3 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_l250_m2_e1 | het | 75.0000 | 60.0000 | 100.0000 | 96.8421 | 3 | 2 | 3 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | map_siren | hetalt | 87.5000 | 77.7778 | 100.0000 | 84.0000 | 56 | 16 | 16 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | segdup | homalt | 96.7033 | 93.6170 | 100.0000 | 90.2870 | 44 | 3 | 44 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | tech_badpromoters | * | 96.0000 | 92.3077 | 100.0000 | 47.8261 | 12 | 1 | 12 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | tech_badpromoters | het | 92.3077 | 85.7143 | 100.0000 | 41.6667 | 6 | 1 | 7 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | tech_badpromoters | hetalt | 100.0000 | 100.0000 | 100.0000 | 33.3333 | 3 | 0 | 2 | 0 | 0 | ||
| gduggal-bwafb | INDEL | I6_15 | tech_badpromoters | homalt | 100.0000 | 100.0000 | 100.0000 | 62.5000 | 3 | 0 | 3 | 0 | 0 | ||