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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt

« 1 2 ... 1515 1516 1517 1518 1519 1520 1521 1522 1523 ... 1720 1721 » 75901-75950 / 86044 show all
ckim-gatk	INDEL	I1_5	func_cds	hetalt	100.0000	100.0000	100.0000	0.0000	2	0	2	0	0
ckim-gatk	INDEL	I1_5	func_cds	homalt	100.0000	100.0000	100.0000	31.2139	119	0	119	0	0
ckim-gatk	INDEL	I1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*	100.0000	100.0000	100.0000	99.8670	1	0	1	0	0
ckim-gatk	INDEL	I1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	96.1538	1	0	1	0	0
ckim-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	91.6129	84.5238	100.0000	53.8961	71	13	71	0	0
ckim-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*	100.0000	100.0000	100.0000	99.8621	1	0	1	0	0
ckim-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	95.8333	1	0	1	0	0
ckim-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	95.8140	91.9643	100.0000	71.9346	103	9	103	0	0
ckim-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	97.4359	95.0000	100.0000	78.8104	57	3	57	0	0
ckim-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	91.5952	84.4937	100.0000	35.0348	534	98	560	0	0
ckim-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_homopolymer_gt10	*	100.0000	100.0000	100.0000	99.9933	1	0	1	0	0
ckim-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_homopolymer_gt10	hetalt	100.0000	100.0000	100.0000	99.9836	1	0	1	0	0
ckim-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	96.9476	94.0760	100.0000	38.5189	1064	67	1071	0	0
ckim-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_51to200	hetalt	95.6731	91.7051	100.0000	35.4740	199	18	211	0	0
ckim-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_11to50	hetalt	97.7124	95.5272	100.0000	30.1402	299	14	299	0	0
ckim-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_51to200	hetalt	97.7778	95.6522	100.0000	8.3333	22	1	22	0	0
ckim-gatk	INDEL	I1_5	map_l100_m0_e0	hetalt	100.0000	100.0000	100.0000	93.0233	9	0	9	0	0
ckim-gatk	INDEL	I1_5	map_l100_m1_e0	hetalt	96.4706	93.1818	100.0000	88.4507	41	3	41	0	0
ckim-gatk	INDEL	I1_5	map_l100_m2_e0	hetalt	96.4706	93.1818	100.0000	89.3782	41	3	41	0	0
ckim-gatk	INDEL	I1_5	map_l100_m2_e1	hetalt	96.5517	93.3333	100.0000	89.3401	42	3	42	0	0
ckim-gatk	INDEL	I1_5	map_l125_m0_e0	hetalt	100.0000	100.0000	100.0000	95.7447	4	0	4	0	0
ckim-gatk	INDEL	I1_5	map_l125_m1_e0	hetalt	100.0000	100.0000	100.0000	93.0612	17	0	17	0	0
ckim-gatk	INDEL	I1_5	map_l125_m2_e0	hetalt	100.0000	100.0000	100.0000	93.2143	19	0	19	0	0
ckim-gatk	INDEL	I1_5	map_l125_m2_e1	hetalt	100.0000	100.0000	100.0000	93.3333	19	0	19	0	0
ckim-gatk	INDEL	I1_5	map_l150_m0_e0	hetalt	100.0000	100.0000	100.0000	95.5224	3	0	3	0	0
ckim-gatk	INDEL	I1_5	map_l150_m1_e0	hetalt	100.0000	100.0000	100.0000	95.1087	9	0	9	0	0
ckim-gatk	INDEL	I1_5	map_l150_m2_e0	hetalt	100.0000	100.0000	100.0000	95.8140	9	0	9	0	0
ckim-gatk	INDEL	I1_5	map_l150_m2_e1	hetalt	100.0000	100.0000	100.0000	95.4545	10	0	10	0	0
ckim-gatk	INDEL	I1_5	map_l250_m1_e0	hetalt	100.0000	100.0000	100.0000	97.8947	2	0	2	0	0
ckim-gatk	INDEL	I1_5	map_l250_m2_e0	hetalt	100.0000	100.0000	100.0000	98.3051	2	0	2	0	0
ckim-gatk	INDEL	I1_5	map_l250_m2_e1	hetalt	100.0000	100.0000	100.0000	98.3333	2	0	2	0	0
ckim-gatk	INDEL	I1_5	map_siren	hetalt	95.3271	91.0714	100.0000	86.8047	102	10	102	0	0
ckim-gatk	INDEL	I1_5	segdup	hetalt	96.7742	93.7500	100.0000	95.8106	45	3	46	0	0
ckim-gatk	INDEL	I1_5	tech_badpromoters	*	100.0000	100.0000	100.0000	54.1667	22	0	22	0	0
ckim-gatk	INDEL	I1_5	tech_badpromoters	het	100.0000	100.0000	100.0000	46.6667	8	0	8	0	0
ckim-gatk	INDEL	I1_5	tech_badpromoters	hetalt	100.0000	100.0000	100.0000	50.0000	1	0	1	0	0
ckim-gatk	INDEL	I1_5	tech_badpromoters	homalt	100.0000	100.0000	100.0000	58.0645	13	0	13	0	0
ckim-gatk	INDEL	I6_15	HG002complexvar	hetalt	95.4701	91.3328	100.0000	52.5604	1117	106	1158	0	0
ckim-gatk	INDEL	I6_15	func_cds	het	100.0000	100.0000	100.0000	44.1860	24	0	24	0	0
ckim-gatk	INDEL	I6_15	func_cds	hetalt	85.7143	75.0000	100.0000	0.0000	3	1	3	0	0
ckim-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	98.1132	96.2963	100.0000	78.8043	78	3	78	0	0
ckim-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	88.0734	78.6885	100.0000	52.4752	48	13	48	0	0
ckim-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.4318	98.8701	100.0000	74.3402	175	2	175	0	0
ckim-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	97.5904	95.2941	100.0000	52.8736	81	4	82	0	0
ckim-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	99.5851	99.1736	100.0000	69.2994	240	2	241	0	0
ckim-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	100.0000	100.0000	100.0000	72.3982	122	0	122	0	0
gduggal-bwaplat	SNP	*	lowcmp_SimpleRepeat_triTR_51to200	*	61.5385	44.4444	100.0000	99.2157	4	5	4	0	0
gduggal-bwaplat	SNP	*	lowcmp_SimpleRepeat_triTR_51to200	het	60.0000	42.8571	100.0000	99.3088	3	4	3	0	0
gduggal-bwaplat	SNP	*	lowcmp_SimpleRepeat_triTR_51to200	homalt	66.6667	50.0000	100.0000	98.6842	1	1	1	0	0
gduggal-bwaplat	SNP	*	map_l100_m0_e0	hetalt	54.5455	37.5000	100.0000	94.8276	6	10	6	0	0

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