PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecision Frac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
73551-73600 / 86044 show all
astatham-gatkINDELD1_5func_cdshet
100.0000
100.0000
100.0000
46.5839
8508600
astatham-gatkINDELD1_5func_cdshomalt
100.0000
100.0000
100.0000
31.4815
7407400
astatham-gatkINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
98.8718
1101100
astatham-gatkINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.7076
80800
astatham-gatkINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
97.2973
10100
astatham-gatkINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.3730
20200
astatham-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
91.3386
84.0580
100.0000
55.7252
58115800
astatham-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
98.9166
1001000
astatham-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.7952
70700
astatham-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.8750
10100
astatham-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.3548
20200
astatham-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
81.9648
369036900
astatham-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
98.1132
10100
astatham-gatkINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.3684
10100
astatham-gatkINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.9992
10100
astatham-gatkINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.9920
10100
astatham-gatkINDELD1_5lowcmp_SimpleRepeat_triTR_11to50homalt
100.0000
100.0000
100.0000
41.6667
13300133000
astatham-gatkINDELD1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
96.8421
93.8776
100.0000
26.9841
4634600
astatham-gatkINDELD1_5map_l100_m0_e0hetalt
92.3077
85.7143
100.0000
94.0000
1221200
astatham-gatkINDELD1_5map_l100_m1_e0hetalt
95.5556
91.4894
100.0000
90.5495
4344300
astatham-gatkINDELD1_5map_l100_m2_e0hetalt
95.6522
91.6667
100.0000
90.8163
4444500
astatham-gatkINDELD1_5map_l100_m2_e1hetalt
95.9184
92.1569
100.0000
90.4573
4744800
astatham-gatkINDELD1_5map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
97.7778
30300
astatham-gatkINDELD1_5map_l125_m1_e0hetalt
96.0000
92.3077
100.0000
95.7295
1211200
astatham-gatkINDELD1_5map_l125_m2_e0hetalt
96.5517
93.3333
100.0000
95.6656
1411400
astatham-gatkINDELD1_5map_l125_m2_e1hetalt
96.5517
93.3333
100.0000
95.7576
1411400
astatham-gatkINDELD1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
98.0583
20200
astatham-gatkINDELD1_5map_l150_m1_e0hetalt
92.3077
85.7143
100.0000
97.3214
61600
astatham-gatkINDELD1_5map_l150_m2_e0hetalt
92.3077
85.7143
100.0000
97.6190
61600
astatham-gatkINDELD1_5map_l150_m2_e1hetalt
93.3333
87.5000
100.0000
97.2868
71700
astatham-gatkINDELD1_5map_l250_m0_e0homalt
100.0000
100.0000
100.0000
97.3684
1301300
astatham-gatkINDELD1_5map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
97.5000
30300
astatham-gatkINDELD1_5map_l250_m1_e0homalt
99.1150
98.2456
100.0000
94.3434
5615600
astatham-gatkINDELD1_5map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
97.9310
30300
astatham-gatkINDELD1_5map_l250_m2_e0homalt
99.1597
98.3333
100.0000
94.7788
5915900
astatham-gatkINDELD1_5map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
98.0000
30300
astatham-gatkINDELD1_5map_l250_m2_e1homalt
99.1597
98.3333
100.0000
94.9225
5915900
astatham-gatkINDELD1_5map_sirenhetalt
96.9325
94.0476
100.0000
90.6176
7957900
astatham-gatkINDELD1_5segduphetalt
99.0291
98.0769
100.0000
95.5631
5115200
astatham-gatkINDELD1_5segdupwithalt*
100.0000
100.0000
100.0000
99.9943
10100
astatham-gatkINDELD1_5segdupwithalthet
100.0000
100.0000
100.0000
99.9914
10100
astatham-gatkINDELD1_5tech_badpromoters*
97.2973
94.7368
100.0000
48.5714
1811800
astatham-gatkINDELD1_5tech_badpromotershet
93.3333
87.5000
100.0000
58.8235
71700
astatham-gatkINDELD1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
0.0000
20200
astatham-gatkINDELD1_5tech_badpromotershomalt
100.0000
100.0000
100.0000
43.7500
90900
astatham-gatkINDELD6_15decoy*
100.0000
100.0000
100.0000
99.9120
10100
astatham-gatkINDELD6_15decoyhetalt
100.0000
100.0000
100.0000
99.1379
10100
astatham-gatkINDELD6_15func_cds*
100.0000
100.0000
100.0000
56.1224
4304300
astatham-gatkINDELD6_15func_cdshet
100.0000
100.0000
100.0000
53.2258
2902900
astatham-gatkINDELD6_15func_cdshetalt
100.0000
100.0000
100.0000
60.0000
20200