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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1420 1421 1422 1423 1424 1425 1426 1427 1428 ... 1720 1721 » 71151-71200 / 86044 show all
rpoplin-dv42	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	*	99.8378	99.7756	99.9001	47.7433	4002	9	4002	4	0	0.0000
ltrigg-rtg1	SNP	tv	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.8004	99.7008	99.9001	56.9199	6998	21	7003	7	4	57.1429
ckim-gatk	SNP	tv	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.8503	99.8005	99.9001	62.4759	7005	14	7001	7	3	42.8571
bgallagher-sentieon	SNP	ti	map_l125_m1_e0	homalt	99.7370	99.5745	99.9001	63.0037	10998	47	10998	11	9	81.8182
bgallagher-sentieon	SNP	tv	map_l100_m1_e0	homalt	99.7786	99.6572	99.9002	59.2105	9012	31	9012	9	6	66.6667
hfeng-pmm1	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	*	99.5502	99.2026	99.9003	37.1632	18038	145	18035	18	3	16.6667
hfeng-pmm3	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	*	99.5585	99.2191	99.9003	37.7315	18041	142	18038	18	6	33.3333
astatham-gatk	INDEL	I6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	97.6909	95.5769	99.9005	44.3501	2982	138	3011	3	3	100.0000
hfeng-pmm1	INDEL	*	lowcmp_SimpleRepeat_diTR_51to200	hetalt	84.6788	73.4824	99.9005	31.7719	920	332	1004	1	1	100.0000
eyeh-varpipe	SNP	ti	map_l125_m2_e0	homalt	99.8667	99.8327	99.9006	70.5235	11339	19	11058	11	6	54.5455
ndellapenna-hhga	SNP	ti	HG002complexvar	homalt	99.8705	99.8403	99.9007	18.4130	193154	309	193175	192	171	89.0625
rpoplin-dv42	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.8811	99.8613	99.9009	61.7921	10083	14	10083	10	2	20.0000
hfeng-pmm2	INDEL	D1_5	HG002complexvar	*	99.1842	98.4778	99.9009	57.1533	32217	498	32268	32	21	65.6250
jli-custom	SNP	tv	map_l125_m2_e1	homalt	99.7361	99.5719	99.9009	65.9064	6048	26	6048	6	5	83.3333
ltrigg-rtg2	INDEL	I1_5	HG002complexvar	homalt	99.5439	99.1894	99.9010	45.4107	13338	109	13119	13	8	61.5385
raldana-dualsentieon	INDEL	D6_15	HG002complexvar	hetalt	97.2668	94.7680	99.9010	47.1204	960	53	1009	1	1	100.0000
raldana-dualsentieon	SNP	tv	map_l125_m2_e1	homalt	99.7857	99.6707	99.9010	65.8803	6054	20	6054	6	3	50.0000
ckim-dragen	SNP	tv	map_siren	homalt	99.7415	99.5824	99.9011	51.8437	17168	72	17170	17	15	88.2353
hfeng-pmm2	SNP	ti	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.7907	99.6802	99.9014	44.8913	4052	13	4052	4	1	25.0000
hfeng-pmm2	SNP	tv	map_siren	homalt	99.9014	99.9014	99.9014	56.1199	17223	17	17220	17	9	52.9412
hfeng-pmm1	SNP	tv	map_siren	homalt	99.8956	99.8898	99.9014	56.0205	17221	19	17219	17	8	47.0588
hfeng-pmm2	INDEL	*	lowcmp_SimpleRepeat_diTR_51to200	hetalt	85.2596	74.3610	99.9015	32.1524	931	321	1014	1	1	100.0000
ltrigg-rtg2	SNP	ti	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.7907	99.6802	99.9015	41.5683	4052	13	4057	4	3	75.0000
jli-custom	SNP	*	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.9097	99.9179	99.9015	54.3245	6083	5	6083	6	4	66.6667
eyeh-varpipe	SNP	ti	map_l125_m2_e1	homalt	99.8678	99.8342	99.9015	70.5782	11439	19	11154	11	6	54.5455
gduggal-bwavard	SNP	ti	map_l100_m1_e0	homalt	98.5262	97.1882	99.9016	59.9578	17455	505	17256	17	13	76.4706
jli-custom	SNP	tv	map_l150_m2_e0	homalt	99.6809	99.4612	99.9016	70.2372	4061	22	4061	4	4	100.0000
jli-custom	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_11to50	*	99.7544	99.6076	99.9016	41.9475	4061	16	4062	4	1	25.0000
jli-custom	INDEL	I6_15	*	hetalt	97.1523	94.5503	99.9016	36.5262	8085	466	8123	8	8	100.0000
jlack-gatk	INDEL	I1_5	HG002compoundhet	hetalt	94.9037	90.3820	99.9017	57.2515	10102	1075	10162	10	9	90.0000
ltrigg-rtg1	INDEL	I1_5	*	homalt	99.7620	99.6227	99.9017	50.6392	60199	228	59978	59	47	79.6610
ckim-vqsr	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_11to50	*	99.7790	99.6566	99.9017	44.3228	4063	14	4066	4	1	25.0000
raldana-dualsentieon	SNP	tv	map_l150_m2_e0	homalt	99.7424	99.5836	99.9017	70.2246	4066	17	4066	4	2	50.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_11to50	*	99.8282	99.7547	99.9018	44.3519	4067	10	4070	4	1	25.0000
ckim-vqsr	INDEL	D1_5	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.9116	99.9214	99.9018	54.3272	10170	8	10170	10	10	100.0000
ckim-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.9312	99.9607	99.9018	54.3175	10174	4	10174	10	10	100.0000
ckim-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_11to50	*	99.8282	99.7547	99.9018	44.2986	4067	10	4070	4	1	25.0000
ckim-dragen	SNP	tv	HG002complexvar	het	99.9058	99.9098	99.9019	22.2740	150595	136	150740	148	70	47.2973
jlack-gatk	SNP	ti	map_l125_m2_e0	homalt	99.2423	98.5913	99.9019	66.3888	11198	160	11198	11	9	81.8182
hfeng-pmm3	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	99.2263	98.5599	99.9019	64.0348	17315	253	17306	17	4	23.5294
gduggal-bwaplat	INDEL	D1_5	segdup	*	95.9962	92.3844	99.9019	96.4456	1019	84	1018	1	0	0.0000
eyeh-varpipe	SNP	ti	map_l150_m1_e0	homalt	99.8623	99.8226	99.9020	73.1001	7314	13	7136	7	5	71.4286
raldana-dualsentieon	SNP	*	map_l150_m1_e0	homalt	99.7067	99.5121	99.9020	67.3803	11218	55	11218	11	8	72.7273
ndellapenna-hhga	SNP	*	map_l150_m1_e0	homalt	99.6799	99.4589	99.9020	69.8014	11212	61	11212	11	10	90.9091
bgallagher-sentieon	SNP	tv	map_l100_m2_e0	homalt	99.7827	99.6636	99.9021	61.6697	9183	31	9183	9	6	66.6667
gduggal-bwaplat	SNP	ti	map_l150_m1_e0	homalt	59.0384	41.8998	99.9022	84.1026	3070	4257	3066	3	3	100.0000
astatham-gatk	SNP	ti	map_l125_m2_e0	homalt	99.4872	99.0755	99.9023	65.7910	11253	105	11253	11	10	90.9091
hfeng-pmm2	INDEL	*	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.9159	99.9292	99.9026	55.9613	11288	8	11288	11	10	90.9091
jlack-gatk	SNP	ti	map_l125_m2_e1	homalt	99.2489	98.6036	99.9027	66.4043	11298	160	11298	11	9	81.8182
jli-custom	INDEL	*	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.9292	99.9557	99.9027	55.9852	11291	5	11292	11	11	100.0000

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