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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1399 1400 1401 1402 1403 1404 1405 1406 1407 ... 1720 1721 » 70101-70150 / 86044 show all
hfeng-pmm2	SNP	ti	map_l125_m2_e1	homalt	99.8298	99.8254	99.8342	68.6316	11438	20	11438	19	9	47.3684
jlack-gatk	INDEL	D1_5	map_l100_m2_e0	homalt	99.1763	98.5270	99.8342	82.2959	602	9	602	1	1	100.0000
ckim-vqsr	SNP	*	HG002compoundhet	*	98.9056	97.9940	99.8343	41.9777	25304	518	25301	42	32	76.1905
jmaeng-gatk	INDEL	I1_5	HG002complexvar	het	99.6695	99.5052	99.8344	58.2792	18099	90	18081	30	14	46.6667
ltrigg-rtg1	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	99.6218	99.4099	99.8345	72.5123	5391	32	5430	9	0	0.0000
ltrigg-rtg1	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	99.6218	99.4099	99.8345	72.5123	5391	32	5430	9	0	0.0000
ltrigg-rtg2	SNP	*	map_l125_m0_e0	het	97.5444	95.3569	99.8346	54.8630	12076	588	12074	20	0	0.0000
dgrover-gatk	SNP	*	lowcmp_SimpleRepeat_diTR_11to50	*	99.7832	99.7317	99.8347	68.1691	9666	26	9666	16	12	75.0000
ckim-gatk	SNP	*	lowcmp_SimpleRepeat_diTR_11to50	*	99.7780	99.7214	99.8347	68.2340	9665	27	9665	16	13	81.2500
ltrigg-rtg2	SNP	*	map_l100_m0_e0	*	98.7191	97.6280	99.8350	53.7664	32062	779	32065	53	9	16.9811
gduggal-snapvard	INDEL	*	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	97.4077	95.0956	99.8350	48.2245	10742	554	19971	33	33	100.0000
gduggal-bwavard	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_11to50	homalt	80.0060	66.7485	99.8350	38.5707	2447	1219	2420	4	4	100.0000
ndellapenna-hhga	SNP	ti	map_siren	het	99.3687	98.9067	99.8350	52.2716	61700	682	61701	102	39	38.2353
egarrison-hhga	SNP	ti	map_l125_m1_e0	*	99.4628	99.0932	99.8351	68.9921	29069	266	29069	48	24	50.0000
raldana-dualsentieon	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	99.6302	99.4260	99.8353	48.5599	2425	14	2425	4	0	0.0000
raldana-dualsentieon	INDEL	*	lowcmp_SimpleRepeat_triTR_11to50	*	99.4334	99.0346	99.8354	46.3028	6668	65	6670	11	7	63.6364
astatham-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	96.8787	94.0922	99.8354	35.2518	2389	150	2426	4	4	100.0000
asubramanian-gatk	SNP	tv	map_l100_m1_e0	het	60.4053	43.3028	99.8355	88.3520	6676	8741	6674	11	2	18.1818
astatham-gatk	INDEL	*	lowcmp_SimpleRepeat_triTR_11to50	het	99.6989	99.5626	99.8355	53.1956	3642	16	3641	6	1	16.6667
hfeng-pmm1	INDEL	D1_5	map_l100_m2_e0	homalt	99.5898	99.3453	99.8355	81.4067	607	4	607	1	1	100.0000
jlack-gatk	SNP	ti	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	99.5082	99.1830	99.8355	58.4841	1214	10	1214	2	2	100.0000
hfeng-pmm2	INDEL	*	lowcmp_SimpleRepeat_triTR_11to50	*	99.4783	99.1237	99.8355	46.7341	6674	59	6676	11	5	45.4545
hfeng-pmm3	INDEL	D1_5	map_l100_m2_e0	homalt	99.5898	99.3453	99.8355	80.5937	607	4	607	1	1	100.0000
ltrigg-rtg2	SNP	*	map_l250_m2_e1	het	95.8720	92.2112	99.8355	76.2366	4854	410	4854	8	1	12.5000
asubramanian-gatk	INDEL	I16_PLUS	HG002complexvar	het	97.3776	95.0376	99.8358	65.4566	632	33	608	1	1	100.0000
gduggal-snapvard	SNP	*	map_siren	homalt	98.0593	96.3449	99.8358	52.8740	53140	2016	52295	86	67	77.9070
ckim-dragen	SNP	ti	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	98.8879	97.9575	99.8361	58.2906	1199	25	1218	2	2	100.0000
ltrigg-rtg2	SNP	ti	*	het	99.8504	99.8647	99.8361	15.7716	1280159	1735	1280167	2101	75	3.5697
ltrigg-rtg2	INDEL	D1_5	map_l100_m2_e1	homalt	98.8603	97.9032	99.8363	77.0646	607	13	610	1	1	100.0000
ckim-vqsr	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	99.9181	100.0000	99.8363	52.3782	2439	0	2439	4	0	0.0000
egarrison-hhga	SNP	*	map_siren	het	99.5365	99.2384	99.8364	54.0342	90298	693	90299	148	53	35.8108
astatham-gatk	INDEL	*	lowcmp_SimpleRepeat_triTR_11to50	*	99.7622	99.6881	99.8364	49.1224	6712	21	6714	11	6	54.5455
asubramanian-gatk	SNP	*	map_l100_m2_e1	*	61.2013	44.1254	99.8365	85.2564	32978	41759	32972	54	14	25.9259
hfeng-pmm2	SNP	*	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	99.0524	98.2806	99.8365	59.1178	34810	609	34800	57	5	8.7719
jlack-gatk	INDEL	D1_5	map_l100_m2_e1	homalt	99.1883	98.5484	99.8366	82.3580	611	9	611	1	1	100.0000
ckim-dragen	SNP	tv	map_l100_m2_e0	homalt	99.6739	99.5116	99.8367	60.2338	9169	45	9169	15	13	86.6667
gduggal-bwavard	SNP	ti	map_l150_m2_e0	homalt	98.6236	97.4396	99.8368	73.2710	7421	195	7339	12	9	75.0000
hfeng-pmm3	SNP	ti	map_l125_m1_e0	homalt	99.8144	99.7918	99.8370	66.0308	11022	23	11022	18	8	44.4444
jlack-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	95.3785	91.3011	99.8371	36.7431	2414	230	2451	4	3	75.0000
ckim-dragen	INDEL	*	lowcmp_SimpleRepeat_homopolymer_6to10	*	99.8088	99.7806	99.8371	58.7309	28198	62	28192	46	19	41.3043
ltrigg-rtg2	SNP	ti	map_l125_m1_e0	het	98.5415	97.2791	99.8371	55.5647	17769	497	17770	29	4	13.7931
rpoplin-dv42	INDEL	D1_5	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.7968	99.7563	99.8374	54.8306	14734	36	14736	24	17	70.8333
qzeng-custom	SNP	ti	lowcmp_SimpleRepeat_triTR_11to50	het	99.4125	98.9911	99.8375	43.7900	2453	25	2458	4	1	25.0000
hfeng-pmm1	SNP	tv	lowcmp_SimpleRepeat_quadTR_11to50	*	99.4544	99.0741	99.8377	37.0787	7383	69	7380	12	3	25.0000
ckim-isaac	SNP	ti	map_l100_m1_e0	*	80.0185	66.7647	99.8378	62.0110	32001	15930	32005	52	10	19.2308
ltrigg-rtg2	INDEL	I6_15	HG002compoundhet	hetalt	97.3702	95.0217	99.8378	29.8617	8112	425	8001	13	12	92.3077
jlack-gatk	SNP	*	map_l150_m1_e0	homalt	99.0703	98.3146	99.8379	69.3588	11083	190	11083	18	13	72.2222
hfeng-pmm3	INDEL	D1_5	map_l100_m2_e1	homalt	99.5958	99.3548	99.8379	80.6765	616	4	616	1	1	100.0000
hfeng-pmm1	INDEL	D1_5	map_l100_m2_e1	homalt	99.5958	99.3548	99.8379	81.4993	616	4	616	1	1	100.0000
raldana-dualsentieon	SNP	ti	lowcmp_SimpleRepeat_triTR_11to50	het	99.6360	99.4350	99.8379	27.9708	2464	14	2463	4	0	0.0000

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