PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecision Frac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
6951-7000 / 86044 show all
ckim-vqsrSNPtvmap_l250_m2_e0hetalt
0.0000
100.0000
05000
ckim-vqsrSNPtvmap_l250_m2_e1hetalt
0.0000
100.0000
05000
ckim-vqsrSNPtvsegdupwithalt*
0.0000
100.0000
00000
ckim-vqsrSNPtvsegdupwithalthet
0.0000
100.0000
00000
ckim-vqsrSNPtvsegdupwithalthetalt
0.0000
100.0000
00000
ckim-vqsrSNPtvsegdupwithalthomalt
0.0000
100.0000
00000
dgrover-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
dgrover-gatkINDEL*lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
dgrover-gatkINDEL*lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
dgrover-gatkINDEL*lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
dgrover-gatkINDEL*map_l250_m0_e0hetalt
0.0000
100.0000
00000
dgrover-gatkINDEL*segdupwithalthetalt
0.0000
100.0000
00000
dgrover-gatkINDEL*segdupwithalthomalt
0.0000
100.0000
00000
egarrison-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
egarrison-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
egarrison-hhgaINDELD16_PLUSmap_l150_m0_e0hetalt
0.0000
100.0000
00000
egarrison-hhgaINDELD16_PLUSmap_l150_m0_e0homalt
0.0000
100.0000
00000
egarrison-hhgaINDELD16_PLUSmap_l150_m1_e0homalt
0.0000
100.0000
00000
egarrison-hhgaINDELD16_PLUSmap_l150_m2_e0homalt
0.0000
100.0000
00000
egarrison-hhgaINDELD16_PLUSmap_l150_m2_e1homalt
0.0000
100.0000
00000
egarrison-hhgaINDELD16_PLUSmap_l250_m0_e0homalt
0.0000
100.0000
00000
egarrison-hhgaINDELD16_PLUSmap_l250_m1_e0homalt
0.0000
100.0000
00000
egarrison-hhgaINDELD16_PLUSsegdupwithalt*
0.0000
100.0000
00000
egarrison-hhgaINDELD16_PLUSsegdupwithalthet
0.0000
100.0000
00000
egarrison-hhgaINDELD16_PLUSsegdupwithalthetalt
0.0000
100.0000
00000
egarrison-hhgaINDELD16_PLUSsegdupwithalthomalt
0.0000
100.0000
00000
egarrison-hhgaINDELD16_PLUStech_badpromotershomalt
0.0000
100.0000
00000
egarrison-hhgaINDELD1_5decoyhetalt
0.0000
100.0000
01000
egarrison-hhgaINDELD1_5func_cdshetalt
0.0000
100.0000
00000
egarrison-hhgaINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
egarrison-hhgaINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
egarrison-hhgaINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
egarrison-hhgaINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
egarrison-hhgaINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
egarrison-hhgaINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
egarrison-hhgaINDELD1_5map_l250_m0_e0hetalt
0.0000
100.0000
00000
egarrison-hhgaINDELD1_5segdupwithalthetalt
0.0000
100.0000
00000
egarrison-hhgaINDELD1_5segdupwithalthomalt
0.0000
100.0000
00000
egarrison-hhgaINDELD6_15decoy*
0.0000
100.0000
01000
egarrison-hhgaINDELD6_15decoyhet
0.0000
100.0000
00000
egarrison-hhgaINDELD6_15decoyhetalt
0.0000
100.0000
01000
egarrison-hhgaINDELD6_15decoyhomalt
0.0000
100.0000
00000
egarrison-hhgaINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
50.0000
100.0000
11000
egarrison-hhgaINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
01000
egarrison-hhgaINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
50.0000
100.0000
11000
egarrison-hhgaINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
egarrison-hhgaINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
egarrison-hhgaINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
01000
egarrison-hhgaINDELD6_15map_l250_m0_e0hetalt
0.0000
100.0000
00000
egarrison-hhgaINDELD6_15segdupwithalt*
0.0000
100.0000
00000