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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1390 1391 1392 1393 1394 1395 1396 1397 1398 ... 1720 1721 » 69651-69700 / 86044 show all
jli-custom	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_11to50	*	99.0403	98.2857	99.8066	60.5344	1032	18	1032	2	2	100.0000
mlin-fermikit	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	98.9788	98.1646	99.8066	46.6460	1551	29	1548	3	1	33.3333
jmaeng-gatk	INDEL	I1_5	HG002complexvar	*	99.3649	98.9270	99.8067	56.9963	33005	358	33051	64	46	71.8750
ckim-vqsr	SNP	*	func_cds	*	99.7574	99.7080	99.8069	31.6969	18097	53	18094	35	0	0.0000
astatham-gatk	INDEL	I1_5	HG002complexvar	homalt	99.8625	99.9182	99.8069	52.9404	13437	11	13442	26	26	100.0000
astatham-gatk	SNP	tv	HG002compoundhet	*	99.1767	98.5543	99.8069	49.0836	8794	129	8789	17	16	94.1176
hfeng-pmm1	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_11to50	*	98.9744	98.1557	99.8069	48.5309	3619	68	3619	7	4	57.1429
cchapple-custom	SNP	tv	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	99.7125	99.6183	99.8069	55.4600	522	2	517	1	1	100.0000
hfeng-pmm2	INDEL	I1_5	HG002complexvar	homalt	99.8477	99.8885	99.8069	52.0702	13433	15	13437	26	25	96.1538
hfeng-pmm3	SNP	ti	map_l100_m0_e0	homalt	99.7684	99.7299	99.8069	62.9000	7753	21	7753	15	6	40.0000
hfeng-pmm1	SNP	ti	map_l100_m0_e0	homalt	99.7619	99.7170	99.8069	63.0178	7752	22	7752	15	6	40.0000
astatham-gatk	INDEL	*	HG002complexvar	het	99.5588	99.3119	99.8070	57.7885	45894	318	45516	88	55	62.5000
ltrigg-rtg1	INDEL	D6_15	*	homalt	99.3481	98.8935	99.8070	44.0385	6256	70	6207	12	9	75.0000
dgrover-gatk	INDEL	I1_5	HG002complexvar	homalt	99.8663	99.9256	99.8070	53.0009	13438	10	13443	26	25	96.1538
egarrison-hhga	SNP	tv	map_l100_m2_e0	*	99.4951	99.1851	99.8071	65.1309	24829	204	24829	48	19	39.5833
jpowers-varprowl	SNP	ti	map_l250_m1_e0	homalt	98.1979	96.6397	99.8072	88.8547	1553	54	1553	3	3	100.0000
qzeng-custom	SNP	*	HG002complexvar	*	99.1204	98.4430	99.8072	19.9398	742639	11746	723843	1398	631	45.1359
ghariani-varprowl	SNP	ti	map_l250_m1_e0	homalt	98.1979	96.6397	99.8072	87.4354	1553	54	1553	3	3	100.0000
ltrigg-rtg1	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	97.7454	95.7670	99.8073	46.5308	4570	202	4661	9	9	100.0000
rpoplin-dv42	SNP	*	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.8741	99.9407	99.8075	37.7626	6741	4	6741	13	5	38.4615
gduggal-bwavard	SNP	tv	map_l125_m1_e0	homalt	98.7755	97.7645	99.8076	66.5926	5729	131	5706	11	9	81.8182
rpoplin-dv42	INDEL	D6_15	*	homalt	99.1567	98.5141	99.8078	51.4461	6232	94	6233	12	7	58.3333
ckim-vqsr	INDEL	*	lowcmp_SimpleRepeat_triTR_11to50	het	99.6165	99.4259	99.8079	54.6157	3637	21	3636	7	2	28.5714
hfeng-pmm1	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_11to50	*	99.3302	98.8571	99.8079	61.2435	1038	12	1039	2	2	100.0000
hfeng-pmm3	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	99.1963	98.5919	99.8081	71.9245	32768	468	32762	63	44	69.8413
ltrigg-rtg2	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	98.7497	97.7134	99.8083	64.4325	3675	86	3644	7	4	57.1429
ltrigg-rtg2	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	98.7497	97.7134	99.8083	64.4325	3675	86	3644	7	4	57.1429
ltrigg-rtg1	SNP	ti	map_l100_m1_e0	*	99.3155	98.8275	99.8083	56.5736	47369	562	47371	91	27	29.6703
ckim-gatk	INDEL	*	lowcmp_SimpleRepeat_triTR_11to50	het	99.7401	99.6720	99.8083	54.5545	3646	12	3645	7	2	28.5714
hfeng-pmm1	SNP	tv	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	99.6176	99.4275	99.8084	67.3342	521	3	521	1	1	100.0000
hfeng-pmm2	SNP	tv	HG002compoundhet	het	94.2146	89.2146	99.8084	51.8565	4169	504	4167	8	2	25.0000
asubramanian-gatk	SNP	tv	segdup	homalt	98.1636	96.5720	99.8085	89.8001	3127	111	3127	6	6	100.0000
qzeng-custom	SNP	ti	lowcmp_SimpleRepeat_homopolymer_6to10	*	99.6888	99.5692	99.8086	46.3323	6241	27	6258	12	2	16.6667
hfeng-pmm3	SNP	tv	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	99.7135	99.6183	99.8088	66.4313	522	2	522	1	1	100.0000
jmaeng-gatk	SNP	tv	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	99.7135	99.6183	99.8088	64.2271	522	2	522	1	1	100.0000
ltrigg-rtg1	SNP	ti	map_l150_m1_e0	*	98.9175	98.0418	99.8089	66.8010	19326	386	19329	37	16	43.2432
astatham-gatk	SNP	ti	map_l250_m1_e0	homalt	98.6465	97.5109	99.8089	85.2776	1567	40	1567	3	3	100.0000
gduggal-snapvard	SNP	tv	map_l100_m2_e0	homalt	98.2526	96.7441	99.8089	63.7260	8914	300	8881	17	11	64.7059
egarrison-hhga	SNP	tv	map_l100_m2_e1	*	99.4981	99.1892	99.8090	65.1604	25078	205	25078	48	19	39.5833
jli-custom	SNP	ti	lowcmp_SimpleRepeat_diTR_11to50	het	99.7298	99.6506	99.8091	71.0989	3137	11	3137	6	4	66.6667
ghariani-varprowl	SNP	ti	map_l100_m1_e0	homalt	99.4271	99.0479	99.8092	60.5686	17789	171	17789	34	26	76.4706
bgallagher-sentieon	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.8910	99.9727	99.8094	51.1312	3665	1	3665	7	7	100.0000
asubramanian-gatk	SNP	*	map_l125_m0_e0	*	35.5829	21.6508	99.8098	95.1193	4197	15188	4197	8	5	62.5000
ckim-dragen	SNP	*	map_l125_m1_e0	homalt	99.5672	99.3256	99.8098	61.0436	16791	114	16796	32	29	90.6250
ltrigg-rtg2	SNP	ti	map_l125_m2_e0	het	98.5679	97.3564	99.8099	58.2477	18377	499	18379	35	4	11.4286
jlack-gatk	SNP	tv	map_l125_m1_e0	homalt	99.1843	98.5666	99.8099	65.3618	5776	84	5776	11	7	63.6364
hfeng-pmm2	SNP	*	map_l125_m2_e0	homalt	99.8130	99.8158	99.8101	69.0538	17343	32	17343	33	14	42.4242
jli-custom	INDEL	D1_5	*	homalt	99.8764	99.9428	99.8102	61.2620	48898	28	48904	93	90	96.7742
jmaeng-gatk	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	99.8418	99.8734	99.8102	55.3516	1578	2	1578	3	0	0.0000
bgallagher-sentieon	SNP	*	HG002compoundhet	*	99.8063	99.8025	99.8102	41.0420	25771	51	25764	49	25	51.0204

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