PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecision Frac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
6801-6850 / 86044 show all
ckim-vqsrINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ckim-vqsrINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ckim-vqsrINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ckim-vqsrINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ckim-vqsrINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ckim-vqsrINDELI1_5lowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
100.0000
00000
ckim-vqsrINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
ckim-vqsrINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
ckim-vqsrINDELI1_5lowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
ckim-vqsrINDELI1_5map_l250_m0_e0hetalt
0.0000
100.0000
00000
ckim-vqsrINDELI1_5segdupwithalt*
0.0000
100.0000
00000
ckim-vqsrINDELI1_5segdupwithalthet
0.0000
100.0000
00000
ckim-vqsrINDELI1_5segdupwithalthetalt
0.0000
100.0000
00000
ckim-vqsrINDELI1_5segdupwithalthomalt
0.0000
100.0000
00000
ckim-vqsrINDELI6_15decoy*
0.0000
100.0000
00000
ckim-vqsrINDELI6_15decoyhet
0.0000
100.0000
00000
ckim-vqsrINDELI6_15decoyhetalt
0.0000
100.0000
00000
ckim-vqsrINDELI6_15decoyhomalt
0.0000
100.0000
00000
ckim-vqsrINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ckim-vqsrINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ckim-vqsrINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ckim-vqsrINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ckim-vqsrINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ckim-vqsrINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ckim-vqsrINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ckim-vqsrINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ckim-vqsrINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ckim-vqsrINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ckim-vqsrINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ckim-vqsrINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ckim-vqsrINDELI6_15lowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
100.0000
00000
ckim-vqsrINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
ckim-vqsrINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
ckim-vqsrINDELI6_15lowcmp_SimpleRepeat_quadTR_51to200homalt
0.0000
100.0000
00000
ckim-vqsrINDELI6_15lowcmp_SimpleRepeat_triTR_51to200het
100.0000
100.0000
10000
ckim-vqsrINDELI6_15lowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
ckim-vqsrINDELI6_15map_l125_m0_e0hetalt
0.0000
100.0000
00000
ckim-vqsrINDELI6_15map_l150_m0_e0hetalt
0.0000
100.0000
00000
ckim-vqsrINDELI6_15map_l250_m0_e0*
0.0000
100.0000
01000
ckim-vqsrINDELI6_15map_l250_m0_e0het
0.0000
100.0000
00000
ckim-vqsrINDELI6_15map_l250_m0_e0hetalt
0.0000
100.0000
00000
ckim-vqsrINDELI6_15map_l250_m0_e0homalt
0.0000
100.0000
01000
ckim-vqsrINDELI6_15map_l250_m1_e0hetalt
0.0000
100.0000
00000
ckim-vqsrINDELI6_15map_l250_m2_e0hetalt
0.0000
100.0000
00000
ckim-vqsrINDELI6_15map_l250_m2_e1hetalt
0.0000
100.0000
00000
ckim-vqsrINDELI6_15segdupwithalt*
0.0000
100.0000
00000
ckim-vqsrINDELI6_15segdupwithalthet
0.0000
100.0000
00000
ckim-vqsrINDELI6_15segdupwithalthetalt
0.0000
100.0000
00000
ckim-vqsrINDELI6_15segdupwithalthomalt
0.0000
100.0000
00000
ckim-vqsrSNP*decoy*
0.0000
100.0000
00000