PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecision Frac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
6751-6800 / 86044 show all
ckim-isaacSNPtilowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
ckim-isaacSNPtilowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
ckim-isaacSNPtimap_l150_m0_e0hetalt
0.0000
100.0000
03000
ckim-isaacSNPtimap_l250_m0_e0hetalt
0.0000
100.0000
00000
ckim-isaacSNPtisegdupwithalt*
0.0000
100.0000
00000
ckim-isaacSNPtisegdupwithalthet
0.0000
100.0000
00000
ckim-isaacSNPtisegdupwithalthetalt
0.0000
100.0000
00000
ckim-isaacSNPtisegdupwithalthomalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200het
50.0000
100.0000
11000
ckim-vqsrINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_51to200het
100.0000
100.0000
30000
ckim-vqsrINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_51to200homalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200het
50.0000
100.0000
11000
ckim-vqsrINDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSmap_l250_m0_e0hetalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSmap_l250_m0_e0homalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSmap_l250_m1_e0hetalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSmap_l250_m1_e0homalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSmap_l250_m2_e0hetalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSmap_l250_m2_e0homalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSmap_l250_m2_e1hetalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSmap_l250_m2_e1homalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSsegdupwithalt*
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSsegdupwithalthet
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSsegdupwithalthetalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUSsegdupwithalthomalt
0.0000
100.0000
00000
ckim-vqsrINDELI16_PLUStech_badpromotershetalt
0.0000
100.0000
00000
ckim-vqsrINDELI1_5decoy*
0.0000
100.0000
00000
ckim-vqsrINDELI1_5decoyhet
0.0000
100.0000
00000
ckim-vqsrINDELI1_5decoyhetalt
0.0000
100.0000
00000
ckim-vqsrINDELI1_5decoyhomalt
0.0000
100.0000
00000
ckim-vqsrINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ckim-vqsrINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ckim-vqsrINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000