PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NA Truth TPTruth FNQuery TPQuery FPFP gt% FP ma
4051-4100 / 86044 show all
gduggal-bwafbSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-bwafbSNPtvlowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
100.0000
00000
gduggal-bwafbSNPtvlowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
gduggal-bwafbSNPtvlowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
gduggal-bwafbSNPtvlowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
gduggal-bwafbSNPtvlowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
gduggal-bwafbSNPtvlowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
100.0000
00000
gduggal-bwafbSNPtvlowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
gduggal-bwafbSNPtvmap_l250_m0_e0hetalt
0.0000
100.0000
00000
gduggal-bwafbSNPtvsegdupwithalt*
0.0000
100.0000
00000
gduggal-bwafbSNPtvsegdupwithalthet
0.0000
100.0000
00000
gduggal-bwafbSNPtvsegdupwithalthetalt
0.0000
100.0000
00000
gduggal-bwafbSNPtvsegdupwithalthomalt
0.0000
100.0000
00000
gduggal-bwaplatINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
gduggal-bwaplatINDEL*lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
gduggal-bwaplatINDEL*lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
gduggal-bwaplatINDEL*lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
gduggal-bwaplatINDEL*lowcmp_SimpleRepeat_triTR_gt200*
0.0000
100.0000
00000
gduggal-bwaplatINDEL*lowcmp_SimpleRepeat_triTR_gt200het
0.0000
100.0000
00000
gduggal-bwaplatINDEL*map_l250_m0_e0hetalt
0.0000
100.0000
00000
gduggal-bwaplatINDEL*segdupwithalthetalt
0.0000
100.0000
00000
gduggal-bwaplatINDEL*segdupwithalthomalt
0.0000
100.0000
00000
gduggal-bwaplatINDELC1_5**
60.0000
100.0000
64000
gduggal-bwaplatINDELC1_5*het
55.5556
100.0000
54000
gduggal-bwaplatINDELC1_5*hetalt
100.0000
100.0000
10000
gduggal-bwaplatINDELC1_5*homalt
0.0000
100.0000
00000
gduggal-bwaplatINDELC1_5HG002complexvar*
42.8571
100.0000
34000
gduggal-bwaplatINDELC1_5HG002complexvarhet
42.8571
100.0000
34000
gduggal-bwaplatINDELC1_5HG002complexvarhomalt
0.0000
100.0000
00000
gduggal-bwaplatINDELC1_5decoy*
0.0000
100.0000
00000
gduggal-bwaplatINDELC1_5decoyhet
0.0000
100.0000
00000
gduggal-bwaplatINDELC1_5decoyhetalt
0.0000
100.0000
00000
gduggal-bwaplatINDELC1_5decoyhomalt
0.0000
100.0000
00000
gduggal-bwaplatINDELC1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
gduggal-bwaplatINDELC1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
gduggal-bwaplatINDELC1_5lowcmp_AllRepeats_lt51bp_gt95identity_merged*
33.3333
100.0000
12000
gduggal-bwaplatINDELC1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
33.3333
100.0000
12000
gduggal-bwaplatINDELC1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-bwaplatINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331*
0.0000
100.0000
01000
gduggal-bwaplatINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331het
0.0000
100.0000
01000
gduggal-bwaplatINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
0.0000
100.0000
00000
gduggal-bwaplatINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
gduggal-bwaplatINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
gduggal-bwaplatINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
0.0000
100.0000
00000
gduggal-bwaplatINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
0.0000
100.0000
00000
gduggal-bwaplatINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
0.0000
100.0000
01000
gduggal-bwaplatINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
0.0000
100.0000
01000
gduggal-bwaplatINDELC1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
0.0000
100.0000
00000
gduggal-bwaplatINDELC1_5lowcmp_SimpleRepeat_diTR_11to50*
0.0000
100.0000
00000
gduggal-bwaplatINDELC1_5lowcmp_SimpleRepeat_diTR_11to50homalt
0.0000
100.0000
00000