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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 580 581 582 583 584 585 586 587 588 ... 1720 1721 » 29151-29200 / 86044 show all
astatham-gatk	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	97.6650	96.0317	99.3548	89.1657	1694	70	1694	11	10	90.9091
bgallagher-sentieon	INDEL	*	map_l125_m2_e1	het	97.9886	98.4375	97.5439	89.1635	1386	22	1390	35	5	14.2857
jli-custom	INDEL	I1_5	map_l150_m2_e1	*	98.8688	98.6817	99.0566	89.1616	524	7	525	5	2	40.0000
gduggal-bwavard	INDEL	*	map_l100_m0_e0	*	89.2130	93.9219	84.9537	89.1607	1468	95	1468	260	67	25.7692
bgallagher-sentieon	INDEL	D1_5	map_l150_m1_e0	*	98.2056	99.0237	97.4008	89.1607	710	7	712	19	4	21.0526
gduggal-snapfb	INDEL	D1_5	map_l125_m1_e0	homalt	98.2779	97.9943	98.5632	89.1589	342	7	343	5	3	60.0000
bgallagher-sentieon	INDEL	I1_5	map_l150_m1_e0	*	98.3253	98.4190	98.2318	89.1587	498	8	500	9	2	22.2222
gduggal-snapvard	INDEL	D1_5	map_l125_m1_e0	het	85.4186	98.2094	75.5757	89.1583	713	13	919	297	91	30.6397
hfeng-pmm3	INDEL	D6_15	map_l125_m2_e0	*	97.9757	96.0317	100.0000	89.1577	121	5	121	0	0
dgrover-gatk	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	99.3490	99.4898	99.2086	89.1572	1755	9	1755	14	13	92.8571
gduggal-snapplat	INDEL	I1_5	tech_badpromoters	het	35.2941	37.5000	33.3333	89.1566	3	5	3	6	0	0.0000
mlin-fermikit	INDEL	*	map_l125_m2_e0	hetalt	75.3623	61.9048	96.2963	89.1566	26	16	26	1	0	0.0000
mlin-fermikit	INDEL	I6_15	map_l150_m1_e0	*	62.3288	52.0000	77.7778	89.1566	13	12	14	4	3	75.0000
ndellapenna-hhga	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	90.2276	87.3057	93.3518	89.1559	337	49	337	24	15	62.5000
jlack-gatk	INDEL	*	map_l100_m1_e0	het	93.6574	98.2103	89.5079	89.1540	2195	40	2201	258	20	7.7519
gduggal-snapplat	INDEL	I1_5	map_l100_m0_e0	homalt	86.6295	80.7692	93.4066	89.1538	168	40	170	12	1	8.3333
ckim-gatk	INDEL	D6_15	map_siren	het	96.8229	98.2143	95.4704	89.1534	275	5	274	13	2	15.3846
gduggal-snapfb	INDEL	*	map_l150_m1_e0	*	93.3899	92.3019	94.5038	89.1529	1235	103	1238	72	21	29.1667
eyeh-varpipe	SNP	*	map_l250_m2_e0	homalt	99.7746	99.7022	99.8472	89.1514	2678	8	2613	4	4	100.0000
rpoplin-dv42	INDEL	D16_PLUS	map_l100_m2_e1	*	84.4444	78.3505	91.5663	89.1503	76	21	76	7	3	42.8571
egarrison-hhga	SNP	ti	map_l250_m2_e0	het	98.4630	97.4493	99.4980	89.1481	3171	83	3171	16	6	37.5000
qzeng-custom	INDEL	D6_15	map_l150_m2_e0	homalt	85.7143	85.7143	85.7143	89.1473	24	4	24	4	3	75.0000
gduggal-bwaplat	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	het	40.0000	25.0000	100.0000	89.1473	42	126	42	0	0
bgallagher-sentieon	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	99.4336	99.4962	99.3711	89.1468	790	4	790	5	5	100.0000
gduggal-bwavard	INDEL	D1_5	map_l125_m2_e0	*	92.6484	96.6754	88.9435	89.1467	1105	38	1086	135	19	14.0741
gduggal-bwaplat	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	57.2505	41.9890	89.9408	89.1458	152	210	152	17	17	100.0000
ckim-vqsr	SNP	*	map_l125_m2_e1	het	81.3082	69.1532	98.6474	89.1453	20497	9143	20494	281	4	1.4235
ckim-dragen	INDEL	*	map_l150_m2_e0	homalt	98.5364	98.1289	98.9474	89.1453	472	9	470	5	4	80.0000
jlack-gatk	SNP	*	map_l150_m0_e0	het	91.7997	98.3753	86.0480	89.1426	7811	129	7808	1266	94	7.4250
ckim-dragen	INDEL	D6_15	map_l100_m1_e0	homalt	96.8254	95.3125	98.3871	89.1419	61	3	61	1	1	100.0000
ckim-vqsr	SNP	*	map_l125_m2_e0	het	81.2064	69.0122	98.6348	89.1411	20233	9085	20230	280	4	1.4286
ltrigg-rtg1	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	94.2308	89.0909	100.0000	89.1403	98	12	96	0	0
hfeng-pmm2	SNP	tv	map_l250_m1_e0	*	98.2628	98.3000	98.2257	89.1399	2602	45	2602	47	6	12.7660
jlack-gatk	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	98.3939	98.9796	97.8151	89.1397	1746	18	1746	39	21	53.8462
gduggal-snapfb	SNP	ti	lowcmp_SimpleRepeat_triTR_51to200	*	20.3390	100.0000	11.3208	89.1393	8	0	6	47	1	2.1277
anovak-vg	INDEL	D1_5	map_l125_m0_e0	homalt	82.9069	73.6486	94.8276	89.1386	109	39	110	6	5	83.3333
cchapple-custom	INDEL	I16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	92.5926	100.0000	86.2069	89.1386	25	0	25	4	3	75.0000
jmaeng-gatk	INDEL	D6_15	map_siren	het	97.3300	97.8571	96.8085	89.1371	274	6	273	9	2	22.2222
jmaeng-gatk	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	99.0341	98.8095	99.2597	89.1343	1743	21	1743	13	10	76.9231
ltrigg-rtg2	INDEL	I6_15	segdup	homalt	97.8261	95.7447	100.0000	89.1304	45	2	45	0	0
ciseli-custom	INDEL	D16_PLUS	map_l100_m2_e1	*	43.8881	34.0206	61.8182	89.1304	33	64	34	21	15	71.4286
ckim-gatk	INDEL	D6_15	map_l100_m1_e0	*	95.7529	96.1240	95.3846	89.1304	248	10	248	12	2	16.6667
hfeng-pmm2	INDEL	D6_15	map_l150_m0_e0	hetalt	100.0000	100.0000	100.0000	89.1304	5	0	5	0	0
qzeng-custom	INDEL	C16_PLUS	map_l125_m0_e0	*		0.0000	0.0000	89.1304	0	0	0	5	0	0.0000
ckim-dragen	INDEL	D1_5	map_l125_m0_e0	*	96.1805	96.5726	95.7916	89.1262	479	17	478	21	3	14.2857
ciseli-custom	INDEL	I16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	21.4286	24.0000	19.3548	89.1228	6	19	6	25	21	84.0000
ndellapenna-hhga	INDEL	D6_15	map_l125_m1_e0	*	91.9424	91.4530	92.4370	89.1225	107	10	110	9	5	55.5556
hfeng-pmm3	SNP	*	map_l250_m2_e1	het	98.7819	98.5942	98.9703	89.1221	5190	74	5190	54	3	5.5556
gduggal-bwavard	INDEL	C1_5	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	0.0000	0.0000	100.0000	89.1213	0	0	52	0	0
cchapple-custom	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	91.6233	89.0909	94.3038	89.1185	147	18	149	9	0	0.0000

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