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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 567 568 569 570 571 572 573 574 575 ... 1720 1721 » 28501-28550 / 86044 show all
mlin-fermikit	INDEL	I1_5	map_l125_m2_e0	hetalt	77.4194	63.1579	100.0000	89.6552	12	7	12	0	0
eyeh-varpipe	INDEL	D6_15	map_l150_m2_e1	hetalt	61.5385	44.4444	100.0000	89.6552	4	5	9	0	0
egarrison-hhga	INDEL	D6_15	map_l125_m2_e1	hetalt	67.9537	55.0000	88.8889	89.6552	11	9	8	1	0	0.0000
egarrison-hhga	INDEL	I6_15	map_l125_m0_e0	homalt	100.0000	100.0000	100.0000	89.6552	6	0	6	0	0
egarrison-hhga	INDEL	I6_15	map_l125_m2_e0	homalt	100.0000	100.0000	100.0000	89.6552	15	0	15	0	0
egarrison-hhga	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	90.5405	88.1579	93.0556	89.6552	134	18	134	10	5	50.0000
dgrover-gatk	INDEL	I1_5	map_l100_m2_e0	hetalt	97.6744	95.4545	100.0000	89.6552	42	2	42	0	0
ciseli-custom	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_51to200	homalt	23.5294	100.0000	13.3333	89.6552	1	0	2	13	7	53.8462
jpowers-varprowl	INDEL	I16_PLUS	map_siren	homalt	37.0370	23.8095	83.3333	89.6552	5	16	5	1	1	100.0000
ltrigg-rtg1	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	89.6552	2	0	3	0	0
ltrigg-rtg2	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	89.6552	2	0	3	0	0
dgrover-gatk	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	99.2892	99.4524	99.1266	89.6532	908	5	908	8	7	87.5000
egarrison-hhga	INDEL	*	func_cds	*	99.4388	99.5506	99.3274	89.6520	443	2	443	3	0	0.0000
ckim-isaac	SNP	ti	lowcmp_SimpleRepeat_quadTR_51to200	het	66.2722	72.7273	60.8696	89.6513	48	18	56	36	4	11.1111
bgallagher-sentieon	INDEL	D1_5	map_siren	hetalt	96.3415	94.0476	98.7500	89.6507	79	5	79	1	0	0.0000
bgallagher-sentieon	INDEL	D1_5	map_l150_m2_e1	*	98.2175	98.9717	97.4747	89.6498	770	8	772	20	5	25.0000
jlack-gatk	INDEL	I1_5	map_l100_m2_e0	het	95.4195	98.1084	92.8741	89.6484	778	15	782	60	4	6.6667
bgallagher-sentieon	INDEL	D1_5	map_l150_m2_e0	*	98.3127	99.0826	97.5547	89.6483	756	7	758	19	4	21.0526
ltrigg-rtg1	INDEL	D6_15	map_l125_m0_e0	*	96.7033	93.6170	100.0000	89.6471	44	3	44	0	0
jmaeng-gatk	INDEL	I1_5	map_l100_m2_e0	hetalt	96.4706	93.1818	100.0000	89.6465	41	3	41	0	0
ghariani-varprowl	INDEL	I1_5	map_l100_m1_e0	het	94.4317	98.3269	90.8333	89.6462	764	13	763	77	26	33.7662
dgrover-gatk	INDEL	D6_15	map_l125_m2_e1	homalt	97.2222	94.5946	100.0000	89.6450	35	2	35	0	0
ckim-vqsr	INDEL	D6_15	map_l125_m2_e0	homalt	98.5915	97.2222	100.0000	89.6450	35	1	35	0	0
ckim-gatk	INDEL	D6_15	map_l125_m2_e0	homalt	98.5915	97.2222	100.0000	89.6450	35	1	35	0	0
dgrover-gatk	SNP	tv	map_l250_m1_e0	*	98.0711	97.9600	98.1825	89.6431	2593	54	2593	48	11	22.9167
bgallagher-sentieon	INDEL	I16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	het	95.0986	94.3750	95.8333	89.6403	151	9	138	6	5	83.3333
gduggal-snapplat	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	84.7824	84.1112	85.4645	89.6399	24150	4562	24242	4123	282	6.8397
gduggal-snapplat	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	84.7824	84.1112	85.4645	89.6399	24150	4562	24242	4123	282	6.8397
gduggal-bwavard	INDEL	I1_5	map_l100_m2_e0	het	94.4176	97.9823	91.1032	89.6399	777	16	768	75	36	48.0000
gduggal-bwafb	INDEL	D16_PLUS	map_l125_m1_e0	*	84.0000	77.7778	91.3043	89.6396	21	6	21	2	2	100.0000
ltrigg-rtg1	INDEL	C6_15	lowcmp_SimpleRepeat_quadTR_11to50	het	0.0000	0.0000	100.0000	89.6396	0	0	23	0	0
ckim-isaac	INDEL	*	map_l100_m0_e0	hetalt	82.6291	72.7273	95.6522	89.6396	24	9	22	1	1	100.0000
ghariani-varprowl	INDEL	D1_5	map_l125_m2_e1	*	91.8807	95.8513	88.2259	89.6373	1109	48	1109	148	28	18.9189
anovak-vg	INDEL	D6_15	map_l125_m2_e0	het	77.7080	80.2817	75.2941	89.6341	57	14	64	21	11	52.3810
jmaeng-gatk	INDEL	D1_5	map_l100_m2_e1	het	96.1672	98.7382	93.7267	89.6330	1252	16	1255	84	6	7.1429
eyeh-varpipe	INDEL	*	map_l150_m2_e1	homalt	96.9748	97.1545	96.7957	89.6318	478	14	725	24	24	100.0000
jmaeng-gatk	INDEL	I1_5	map_l100_m2_e1	hetalt	96.5517	93.3333	100.0000	89.6296	42	3	42	0	0
astatham-gatk	INDEL	D6_15	map_l150_m2_e1	homalt	98.2456	96.5517	100.0000	89.6296	28	1	28	0	0
gduggal-snapfb	INDEL	D1_5	map_l125_m2_e0	homalt	98.3490	98.0769	98.6226	89.6286	357	7	358	5	3	60.0000
gduggal-snapvard	INDEL	D1_5	map_l125_m0_e0	*	85.0206	95.5645	76.5721	89.6278	474	22	621	190	41	21.5789
ckim-gatk	INDEL	I1_5	map_l125_m1_e0	*	97.7394	98.7952	96.7059	89.6278	820	10	822	28	3	10.7143
rpoplin-dv42	INDEL	D6_15	map_l100_m0_e0	het	95.1613	98.3333	92.1875	89.6272	59	1	59	5	1	20.0000
rpoplin-dv42	INDEL	I6_15	map_l125_m1_e0	het	83.6364	76.6667	92.0000	89.6266	23	7	23	2	2	100.0000
jli-custom	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	89.7959	91.6667	88.0000	89.6266	22	2	22	3	0	0.0000
gduggal-snapvard	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	35.5756	100.0000	21.6364	89.6259	1	0	513	1858	127	6.8353
gduggal-snapvard	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	35.5756	100.0000	21.6364	89.6259	1	0	513	1858	127	6.8353
gduggal-snapvard	INDEL	D1_5	map_l125_m2_e0	het	85.7414	98.1675	76.1076	89.6257	750	14	962	302	95	31.4570
gduggal-bwafb	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_51to200	het	69.3333	66.6667	72.2222	89.6254	34	17	26	10	3	30.0000
gduggal-bwaplat	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	73.3411	59.7723	94.8795	89.6250	315	212	315	17	16	94.1176
gduggal-snapfb	INDEL	I1_5	map_l150_m2_e0	het	93.8813	94.1748	93.5897	89.6242	291	18	292	20	3	15.0000

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