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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 560 561 562 563 564 565 566 567 568 ... 1720 1721 » 28151-28200 / 86044 show all
asubramanian-gatk	INDEL	I1_5	map_l150_m0_e0	homalt	98.4848	97.0149	100.0000	89.9691	65	2	65	0	0
astatham-gatk	INDEL	I6_15	map_l100_m2_e1	homalt	98.4615	96.9697	100.0000	89.9687	32	1	32	0	0
dgrover-gatk	INDEL	I6_15	map_l100_m2_e0	homalt	98.4615	96.9697	100.0000	89.9687	32	1	32	0	0
eyeh-varpipe	INDEL	D1_5	map_l150_m2_e0	homalt	97.8628	97.9339	97.7918	89.9684	237	5	310	7	7	100.0000
ghariani-varprowl	INDEL	I1_5	map_l125_m2_e0	*	94.2808	95.2159	93.3638	89.9679	816	41	816	58	21	36.2069
asubramanian-gatk	INDEL	D6_15	map_l125_m1_e0	homalt	95.3846	91.1765	100.0000	89.9676	31	3	31	0	0
jpowers-varprowl	INDEL	*	map_l125_m2_e1	het	92.8294	93.3239	92.3401	89.9662	1314	94	1314	109	76	69.7248
jmaeng-gatk	SNP	*	map_l150_m1_e0	het	84.2606	74.8343	96.4038	89.9614	14455	4861	14449	539	39	7.2356
ciseli-custom	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	11.3208	6.7669	34.6154	89.9614	9	124	9	17	13	76.4706
eyeh-varpipe	INDEL	D6_15	map_l150_m2_e1	*	88.0187	87.0588	89.0000	89.9598	74	11	89	11	11	100.0000
qzeng-custom	INDEL	D1_5	map_l100_m2_e0	het	89.9373	83.9968	96.7820	89.9588	1055	201	1203	40	27	67.5000
anovak-vg	INDEL	*	map_l150_m1_e0	*	72.5622	74.5142	70.7099	89.9578	997	341	1026	425	224	52.7059
hfeng-pmm3	INDEL	I6_15	map_l125_m1_e0	*	92.0000	86.7925	97.8723	89.9573	46	7	46	1	1	100.0000
gduggal-snapvard	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	38.3328	100.0000	23.7109	89.9572	1	0	584	1879	136	7.2379
gduggal-snapvard	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	38.3328	100.0000	23.7109	89.9572	1	0	584	1879	136	7.2379
raldana-dualsentieon	INDEL	I6_15	map_l125_m2_e1	*	88.8889	83.0189	95.6522	89.9563	44	9	44	2	0	0.0000
gduggal-snapfb	SNP	*	map_l250_m2_e1	*	94.6649	94.5286	94.8016	89.9551	7550	437	7550	414	185	44.6860
gduggal-snapplat	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	82.0910	79.0543	85.3704	89.9548	11519	3052	11560	1981	144	7.2691
gduggal-snapplat	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	82.0910	79.0543	85.3704	89.9548	11519	3052	11560	1981	144	7.2691
egarrison-hhga	INDEL	D16_PLUS	map_l125_m1_e0	het	95.2381	100.0000	90.9091	89.9543	20	0	20	2	1	50.0000
gduggal-bwaplat	INDEL	D6_15	map_l125_m1_e0	homalt	78.5714	64.7059	100.0000	89.9543	22	12	22	0	0
ckim-dragen	SNP	tv	lowcmp_SimpleRepeat_quadTR_51to200	*	95.2381	95.2381	95.2381	89.9522	40	2	40	2	0	0.0000
qzeng-custom	INDEL	I16_PLUS	map_l125_m1_e0	het	84.2105	88.8889	80.0000	89.9497	8	1	16	4	0	0.0000
ghariani-varprowl	INDEL	*	map_l100_m2_e0	het	90.5891	98.0928	84.1518	89.9495	2263	44	2262	426	198	46.4789
bgallagher-sentieon	INDEL	D1_5	map_l150_m2_e1	het	97.8305	99.0421	96.6480	89.9495	517	5	519	18	3	16.6667
hfeng-pmm3	INDEL	D1_5	map_siren	hetalt	95.6522	91.6667	100.0000	89.9478	77	7	77	0	0
gduggal-bwaplat	SNP	ti	map_l150_m1_e0	*	68.9590	52.8054	99.3512	89.9469	10409	9303	10413	68	24	35.2941
hfeng-pmm2	SNP	ti	map_l250_m2_e0	*	98.8259	99.1613	98.4927	89.9448	4966	42	4966	76	9	11.8421
dgrover-gatk	SNP	ti	map_l250_m1_e0	*	98.5022	98.3839	98.6208	89.9439	4505	74	4505	63	18	28.5714
gduggal-snapvard	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	0.0000	0.0000	48.1481	89.9415	0	0	91	98	29	29.5918
jlack-gatk	INDEL	D1_5	map_l125_m2_e1	*	94.2377	98.7900	90.0865	89.9406	1143	14	1145	126	6	4.7619
rpoplin-dv42	SNP	*	segdup	*	99.7488	99.7506	99.7470	89.9398	27997	70	27991	71	31	43.6620
bgallagher-sentieon	INDEL	I6_15	map_l100_m2_e0	homalt	98.4615	96.9697	100.0000	89.9371	32	1	32	0	0
gduggal-bwaplat	INDEL	I1_5	map_siren	het	88.1317	79.2980	99.1803	89.9363	1333	348	1331	11	5	45.4545
gduggal-bwafb	SNP	*	map_l250_m2_e1	*	97.8266	97.4959	98.1596	89.9363	7787	200	7787	146	39	26.7123
ckim-vqsr	INDEL	*	map_l150_m2_e0	homalt	98.9583	98.7526	99.1649	89.9349	475	6	475	4	2	50.0000
gduggal-bwaplat	INDEL	I6_15	map_l100_m2_e0	hetalt	81.0811	68.1818	100.0000	89.9329	15	7	15	0	0
gduggal-snapfb	INDEL	*	map_l150_m2_e0	*	93.6073	92.4716	94.7712	89.9313	1302	106	1305	72	21	29.1667
ckim-isaac	INDEL	*	map_l125_m2_e1	het	80.8213	68.5369	98.4709	89.9312	965	443	966	15	5	33.3333
dgrover-gatk	INDEL	I1_5	map_l150_m1_e0	*	98.4186	98.2213	98.6166	89.9303	497	9	499	7	2	28.5714
cchapple-custom	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	96.9979	94.5701	99.5536	89.9281	209	12	223	1	1	100.0000
ndellapenna-hhga	SNP	ti	map_l250_m0_e0	homalt	98.9619	98.3945	99.5360	89.9276	429	7	429	2	2	100.0000
dgrover-gatk	SNP	ti	segdup	*	99.6780	99.8413	99.5153	89.9275	19506	31	19504	95	6	6.3158
ndellapenna-hhga	INDEL	I16_PLUS	map_l125_m1_e0	*	78.5714	73.3333	84.6154	89.9225	11	4	11	2	1	50.0000
ltrigg-rtg1	SNP	tv	segdup	homalt	99.6765	99.9382	99.4161	89.9204	3236	2	3235	19	19	100.0000
hfeng-pmm2	SNP	*	map_l250_m2_e1	*	98.6325	98.8857	98.3807	89.9200	7898	89	7898	130	16	12.3077
hfeng-pmm2	INDEL	D6_15	map_l100_m0_e0	het	95.9350	98.3333	93.6508	89.9200	59	1	59	4	1	25.0000
ltrigg-rtg2	INDEL	D16_PLUS	map_l125_m2_e1	*	92.5212	89.2857	96.0000	89.9194	25	3	24	1	0	0.0000
eyeh-varpipe	INDEL	I1_5	map_l100_m1_e0	hetalt	62.8497	47.7273	92.0000	89.9194	21	23	46	4	3	75.0000
ckim-gatk	SNP	ti	map_l150_m2_e1	het	85.5750	76.4656	97.1484	89.9190	9952	3063	9948	292	33	11.3014

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