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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 547 548 549 550 551 552 553 554 555 ... 1720 1721 » 27501-27550 / 86044 show all
ciseli-custom	INDEL	D6_15	map_l100_m2_e1	het	63.0961	63.7037	62.5000	90.4573	86	49	90	54	13	24.0741
astatham-gatk	INDEL	D1_5	map_l100_m2_e1	hetalt	95.9184	92.1569	100.0000	90.4573	47	4	48	0	0
bgallagher-sentieon	INDEL	D6_15	map_l100_m0_e0	homalt	97.8723	95.8333	100.0000	90.4564	23	1	23	0	0
dgrover-gatk	INDEL	D6_15	segdup	hetalt	94.6237	89.7959	100.0000	90.4555	44	5	44	0	0
egarrison-hhga	INDEL	I1_5	map_l150_m2_e0	*	98.3638	98.4586	98.2692	90.4535	511	8	511	9	2	22.2222
ckim-gatk	INDEL	I1_5	map_l125_m2_e0	*	97.7534	98.8331	96.6970	90.4503	847	10	849	29	3	10.3448
egarrison-hhga	INDEL	D16_PLUS	map_l150_m2_e1	het	96.9697	100.0000	94.1176	90.4494	16	0	16	1	0	0.0000
ciseli-custom	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	53.1268	90.0000	37.6866	90.4490	99	11	101	167	31	18.5629
qzeng-custom	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	94.1461	96.4333	91.9648	90.4466	1460	54	1568	137	36	26.2774
qzeng-custom	INDEL	I6_15	map_l150_m2_e1	homalt	63.4146	50.0000	86.6667	90.4459	4	4	13	2	0	0.0000
egarrison-hhga	SNP	tv	segdup	*	99.5315	99.6015	99.4616	90.4428	8498	34	8498	46	15	32.6087
eyeh-varpipe	INDEL	C6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	0.0000	0.0000	27.0270	90.4393	0	0	10	27	15	55.5556
ckim-vqsr	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	97.7778	95.6522	100.0000	90.4348	66	3	66	0	0
egarrison-hhga	INDEL	D16_PLUS	map_l100_m0_e0	het	85.4749	89.4737	81.8182	90.4348	17	2	18	4	2	50.0000
gduggal-bwaplat	INDEL	D6_15	map_l100_m2_e0	hetalt	65.3465	48.5294	100.0000	90.4348	33	35	33	0	0
gduggal-snapfb	INDEL	I6_15	map_l125_m2_e1	homalt	84.6154	73.3333	100.0000	90.4348	11	4	11	0	0
gduggal-snapplat	INDEL	I1_5	map_l125_m2_e1	homalt	87.5932	81.0496	95.2862	90.4348	278	65	283	14	0	0.0000
gduggal-snapvard	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	4.7064	2.4535	57.5758	90.4348	29	1153	19	14	4	28.5714
cchapple-custom	INDEL	C1_5	lowcmp_SimpleRepeat_quadTR_51to200	*	0.0000	0.0000	45.4545	90.4348	0	0	5	6	1	16.6667
ckim-gatk	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	97.7778	95.6522	100.0000	90.4348	66	3	66	0	0
ltrigg-rtg1	INDEL	D16_PLUS	map_l125_m0_e0	*	86.9565	83.3333	90.9091	90.4348	10	2	10	1	0	0.0000
jmaeng-gatk	INDEL	I6_15	map_l100_m0_e0	homalt	95.6522	91.6667	100.0000	90.4348	11	1	11	0	0
jmaeng-gatk	INDEL	D1_5	map_l150_m0_e0	homalt	98.2249	97.6471	98.8095	90.4328	83	2	83	1	1	100.0000
jpowers-varprowl	INDEL	I1_5	map_l150_m2_e0	*	93.8735	91.5222	96.3489	90.4328	475	44	475	18	11	61.1111
rpoplin-dv42	INDEL	D16_PLUS	map_l100_m1_e0	het	86.3636	82.6087	90.4762	90.4328	38	8	38	4	2	50.0000
dgrover-gatk	INDEL	D6_15	map_l100_m0_e0	*	95.6522	96.1165	95.1923	90.4324	99	4	99	5	1	20.0000
ndellapenna-hhga	INDEL	I6_15	map_l100_m0_e0	*	93.7500	90.9091	96.7742	90.4321	30	3	30	1	0	0.0000
mlin-fermikit	INDEL	D1_5	map_l250_m2_e1	homalt	66.6667	61.6667	72.5490	90.4315	37	23	37	14	14	100.0000
eyeh-varpipe	INDEL	I1_5	map_l100_m2_e0	hetalt	62.8863	47.7273	92.1569	90.4315	21	23	47	4	3	75.0000
ciseli-custom	INDEL	D6_15	map_l100_m2_e0	het	63.7616	64.8855	62.6761	90.4313	85	46	89	53	13	24.5283
qzeng-custom	INDEL	I1_5	map_l100_m2_e1	hetalt	87.5000	77.7778	100.0000	90.4306	35	10	20	0	0
egarrison-hhga	SNP	tv	segdup	het	99.4044	99.4326	99.3762	90.4305	5257	30	5257	33	2	6.0606
jli-custom	INDEL	D6_15	map_l125_m2_e0	het	97.1429	95.7746	98.5507	90.4300	68	3	68	1	0	0.0000
hfeng-pmm2	INDEL	*	map_l125_m0_e0	het	96.7218	97.7853	95.6811	90.4293	574	13	576	26	2	7.6923
bgallagher-sentieon	SNP	tv	map_l250_m2_e1	het	97.6756	98.3715	96.9895	90.4284	1933	32	1933	60	9	15.0000
gduggal-bwaplat	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het	90.2910	84.7806	96.5674	90.4279	3593	645	3601	128	18	14.0625
jli-custom	SNP	tv	segdup	*	99.5673	99.7773	99.3581	90.4270	8513	19	8513	55	6	10.9091
hfeng-pmm2	SNP	ti	segdup	het	99.5229	99.7257	99.3210	90.4269	11997	33	11995	82	0	0.0000
ghariani-varprowl	INDEL	I1_5	map_l100_m2_e0	het	94.1968	98.3607	90.3712	90.4265	780	13	779	83	29	34.9398
ciseli-custom	INDEL	*	map_l125_m0_e0	homalt	64.5934	55.9859	76.3285	90.4255	159	125	158	49	35	71.4286
ghariani-varprowl	INDEL	*	map_siren	*	90.8910	92.7126	89.1397	90.4253	6870	540	6870	837	449	53.6440
dgrover-gatk	SNP	ti	map_l250_m2_e1	*	98.6193	98.5028	98.7362	90.4249	5000	76	5000	64	18	28.1250
gduggal-bwaplat	INDEL	I6_15	map_siren	*	79.0667	66.2295	98.0769	90.4236	202	103	204	4	4	100.0000
astatham-gatk	INDEL	D1_5	map_l150_m0_e0	homalt	99.4152	100.0000	98.8372	90.4232	85	0	85	1	1	100.0000
jpowers-varprowl	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	88.5010	94.0928	83.5366	90.4222	1338	84	1370	270	90	33.3333
ckim-gatk	INDEL	*	map_l100_m2_e0	het	96.1386	98.5696	93.8246	90.4219	2274	33	2279	150	14	9.3333
ckim-isaac	SNP	*	map_l250_m1_e0	*	64.1591	47.3553	99.4475	90.4206	3420	3802	3420	19	3	15.7895
hfeng-pmm2	INDEL	*	map_l150_m2_e1	*	97.8966	98.4712	97.3288	90.4206	1417	22	1421	39	7	17.9487
jmaeng-gatk	SNP	ti	map_l125_m2_e0	hetalt	80.0000	66.6667	100.0000	90.4192	16	8	16	0	0
jmaeng-gatk	SNP	ti	map_l125_m2_e1	hetalt	80.0000	66.6667	100.0000	90.4192	16	8	16	0	0

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