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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 545 546 547 548 549 550 551 552 553 ... 1720 1721 » 27401-27450 / 86044 show all
ckim-gatk	SNP	ti	map_l125_m2_e1	hetalt	76.9231	62.5000	100.0000	90.5063	15	9	15	0	0
hfeng-pmm1	INDEL	*	map_l150_m0_e0	het	96.5886	95.3079	97.9042	90.5060	325	16	327	7	1	14.2857
jmaeng-gatk	SNP	*	map_l150_m2_e1	het	84.9216	75.8827	96.4049	90.5037	15452	4911	15446	576	40	6.9444
asubramanian-gatk	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	87.2342	94.3005	81.1530	90.5033	364	22	366	85	3	3.5294
ghariani-varprowl	INDEL	I1_5	map_l100_m2_e1	het	94.1953	98.2716	90.4437	90.5024	796	14	795	84	29	34.5238
raldana-dualsentieon	INDEL	*	map_l125_m1_e0	hetalt	94.7368	90.0000	100.0000	90.5013	36	4	36	0	0
gduggal-bwaplat	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	74.9596	60.5744	98.3051	90.4992	232	151	232	4	3	75.0000
ghariani-varprowl	INDEL	D6_15	segdup	homalt	86.6667	78.0000	97.5000	90.4988	39	11	39	1	1	100.0000
jpowers-varprowl	INDEL	I1_5	map_l150_m2_e1	*	93.8224	91.5254	96.2376	90.4986	486	45	486	19	11	57.8947
ckim-vqsr	INDEL	D6_15	segdup	hetalt	94.6237	89.7959	100.0000	90.4968	44	5	44	0	0
ckim-gatk	INDEL	D6_15	segdup	hetalt	94.6237	89.7959	100.0000	90.4968	44	5	44	0	0
raldana-dualsentieon	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_51to200	het	92.3077	85.7143	100.0000	90.4959	30	5	23	0	0
raldana-dualsentieon	SNP	tv	lowcmp_SimpleRepeat_quadTR_51to200	het	77.9661	63.8889	100.0000	90.4959	23	13	23	0	0
eyeh-varpipe	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	90.4762	100.0000	82.6087	90.4959	1	0	19	4	3	75.0000
egarrison-hhga	INDEL	I6_15	map_l125_m2_e1	*	95.0495	90.5660	100.0000	90.4950	48	5	48	0	0
hfeng-pmm2	INDEL	I1_5	map_l150_m1_e0	het	97.8291	97.6589	98.0000	90.4943	292	7	294	6	0	0.0000
rpoplin-dv42	SNP	tv	segdup	homalt	99.7378	99.8456	99.6302	90.4939	3233	5	3233	12	12	100.0000
eyeh-varpipe	SNP	*	segdup	*	98.2314	99.8753	96.6407	90.4939	28032	35	27387	952	22	2.3109
eyeh-varpipe	INDEL	I1_5	map_l100_m2_e1	hetalt	61.9926	46.6667	92.3077	90.4936	21	24	48	4	3	75.0000
jmaeng-gatk	SNP	*	map_l150_m2_e0	het	84.8178	75.7016	96.4302	90.4936	15241	4892	15235	564	39	6.9149
gduggal-bwafb	SNP	ti	map_l250_m2_e1	het	97.5129	97.4538	97.5721	90.4931	3215	84	3215	80	23	28.7500
hfeng-pmm1	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	88.4462	80.4348	98.2301	90.4922	222	54	222	4	0	0.0000
anovak-vg	INDEL	D1_5	map_l125_m0_e0	het	80.1955	85.5072	75.5051	90.4922	295	50	299	97	38	39.1753
jmaeng-gatk	SNP	tv	map_l125_m0_e0	*	75.4933	61.9967	96.5015	90.4918	4111	2520	4110	149	7	4.6980
ghariani-varprowl	INDEL	D1_5	map_l125_m1_e0	het	90.8745	98.7603	84.1549	90.4911	717	9	717	135	26	19.2593
hfeng-pmm3	INDEL	D6_15	map_l125_m1_e0	het	98.4127	96.8750	100.0000	90.4908	62	2	62	0	0
gduggal-bwaplat	SNP	ti	map_l150_m2_e1	*	70.2141	54.2827	99.3818	90.4903	11249	9474	11253	70	25	35.7143
gduggal-snapvard	INDEL	*	map_l150_m1_e0	*	84.8673	92.3767	78.4870	90.4884	1236	102	1660	455	138	30.3297
eyeh-varpipe	INDEL	*	map_l150_m0_e0	het	96.4901	96.7742	96.2076	90.4879	330	11	482	19	8	42.1053
dgrover-gatk	INDEL	D1_5	map_l100_m2_e1	hetalt	94.9695	92.1569	97.9592	90.4854	47	4	48	1	0	0.0000
gduggal-bwaplat	SNP	tv	map_l125_m2_e0	het	78.7735	65.3227	99.2001	90.4805	6821	3621	6821	55	13	23.6364
egarrison-hhga	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	*	93.4024	92.4861	94.3370	90.4803	1994	162	1999	120	81	67.5000
gduggal-bwaplat	SNP	ti	map_l150_m2_e0	*	70.0796	54.1244	99.3737	90.4802	11102	9410	11106	70	25	35.7143
ltrigg-rtg1	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	94.1701	92.7632	95.6204	90.4795	141	11	131	6	1	16.6667
gduggal-snapplat	INDEL	*	map_siren	het	79.1743	73.0923	86.3603	90.4763	3295	1213	3552	561	54	9.6257
ghariani-varprowl	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	*	50.0000	50.0000	50.0000	90.4762	1	1	1	1	1	100.0000
ghariani-varprowl	INDEL	I6_15	map_l100_m2_e1	het	79.6992	86.8852	73.6111	90.4762	53	8	53	19	15	78.9474
gduggal-snapplat	INDEL	C1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het		0.0000	0.0000	90.4762	0	0	0	2	0	0.0000
gduggal-snapvard	INDEL	D16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	0.8163	0.4098	100.0000	90.4762	2	486	2	0	0
gduggal-snapvard	INDEL	D16_PLUS	map_l125_m0_e0	het	40.0000	33.3333	50.0000	90.4762	3	6	3	3	0	0.0000
gduggal-bwavard	INDEL	C6_15	map_l125_m2_e0	homalt	0.0000	0.0000	100.0000	90.4762	0	0	2	0	0
gduggal-bwavard	INDEL	I16_PLUS	map_l100_m1_e0	homalt	57.1429	40.0000	100.0000	90.4762	2	3	2	0	0
gduggal-bwavard	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt		0.0000	0.0000	90.4762	0	24	0	2	2	100.0000
gduggal-bwavard	INDEL	I6_15	map_l125_m0_e0	homalt	50.0000	33.3333	100.0000	90.4762	2	4	2	0	0
eyeh-varpipe	INDEL	I16_PLUS	lowcmp_SimpleRepeat_homopolymer_gt10	homalt		0.0000	0.0000	90.4762	0	0	0	2	2	100.0000
hfeng-pmm2	INDEL	I16_PLUS	map_l125_m1_e0	hetalt	80.0000	66.6667	100.0000	90.4762	2	1	2	0	0
jlack-gatk	INDEL	I16_PLUS	map_l125_m1_e0	hetalt	80.0000	66.6667	100.0000	90.4762	2	1	2	0	0
jli-custom	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	89.7959	81.4815	100.0000	90.4762	22	5	18	0	0
anovak-vg	INDEL	C1_5	lowcmp_SimpleRepeat_quadTR_51to200	*		0.0000	0.0000	90.4762	0	0	0	2	0	0.0000
anovak-vg	INDEL	C1_5	lowcmp_SimpleRepeat_quadTR_51to200	het		0.0000	0.0000	90.4762	0	0	0	2	0	0.0000

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