PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NA Truth TPTruth FNQuery TPQuery FPFP gt% FP ma
11801-11850 / 86044 show all
qzeng-customINDELC1_5map_l125_m0_e0*
0.0000
0.0000
100.0000
99.6743
00100
gduggal-snapfbINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_merged*
75.0000
60.0000
100.0000
99.6733
1281200
eyeh-varpipeINDELD1_5decoyhetalt
100.0000
100.0000
100.0000
99.6732
10100
ckim-isaacINDELD1_5decoyhetalt
100.0000
100.0000
100.0000
99.6732
10100
ltrigg-rtg2INDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.6721
20200
rpoplin-dv42INDELD1_5decoyhetalt
100.0000
100.0000
100.0000
99.6700
10100
jlack-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
85.7143
75.0000
100.0000
99.6692
31300
gduggal-snapfbINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.6678
20200
qzeng-customINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
95.2381
90.9091
100.0000
99.6674
101600
gduggal-snapfbINDELD6_15decoyhet
0.0000
0.0000
100.0000
99.6656
00100
gduggal-bwaplatINDELD1_5map_l250_m2_e1hetalt
50.0000
33.3333
100.0000
99.6656
12100
ciseli-customINDELD6_15decoyhomalt
0.0000
0.0000
99.6656
00011
100.0000
ciseli-customINDELC1_5map_l250_m1_e0*
0.0000
0.0000
99.6656
00010
0.0000
rpoplin-dv42INDEL*map_l250_m2_e1*
96.3746
95.7958
96.9605
99.6645
31914319105
50.0000
ckim-dragenINDELD1_5decoyhetalt
100.0000
100.0000
100.0000
99.6610
10100
gduggal-snapfbINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
82.7586
70.5882
100.0000
99.6599
1251200
eyeh-varpipeINDEL*lowcmp_SimpleRepeat_homopolymer_gt10het
71.1860
58.6207
90.6077
99.6597
51363283430
88.2353
rpoplin-dv42INDEL*map_l250_m2_e0*
96.3526
95.7704
96.9419
99.6591
31714317105
50.0000
gduggal-bwaplatINDELD1_5map_l250_m2_e0hetalt
50.0000
33.3333
100.0000
99.6587
12100
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10homalt
92.3077
100.0000
85.7143
99.6584
60610
0.0000
gduggal-bwavardINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
76.9231
100.0000
62.5000
99.6580
1001064
66.6667
ckim-vqsrINDELD16_PLUSdecoyhet
100.0000
100.0000
100.0000
99.6572
40400
ckim-gatkINDELD16_PLUSdecoyhet
100.0000
100.0000
100.0000
99.6572
40400
qzeng-customINDELC1_5map_l250_m2_e1het
0.0000
0.0000
100.0000
99.6564
00100
eyeh-varpipeINDELC1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
100.0000
99.6549
00800
gduggal-snapfbINDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10*
61.1189
45.6140
92.5926
99.6543
26312522
100.0000
qzeng-customINDELC1_5map_l250_m1_e0*
0.0000
0.0000
100.0000
99.6528
00100
qzeng-customINDELC1_5map_l250_m2_e0het
0.0000
0.0000
100.0000
99.6491
00100
ltrigg-rtg1INDELC1_5segduphetalt
0.0000
0.0000
100.0000
99.6479
00100
hfeng-pmm2INDELD1_5decoyhetalt
100.0000
100.0000
100.0000
99.6479
10100
hfeng-pmm1INDELD1_5decoyhetalt
100.0000
100.0000
100.0000
99.6479
10100
rpoplin-dv42INDEL*map_l250_m1_e0*
96.0396
95.4098
96.6777
99.6478
29114291105
50.0000
gduggal-bwaplatINDELI1_5map_l250_m0_e0het
50.0000
33.3333
100.0000
99.6464
510500
jpowers-varprowlINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
62.0690
52.9412
75.0000
99.6461
98933
100.0000
jlack-gatkINDELD16_PLUSdecoyhet
100.0000
100.0000
100.0000
99.6451
40400
gduggal-bwavardINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
66.6667
50.0000
100.0000
99.6441
11100
jli-customINDELD1_5decoyhetalt
100.0000
100.0000
100.0000
99.6429
10100
dgrover-gatkINDELD1_5decoyhetalt
100.0000
100.0000
100.0000
99.6429
10100
jmaeng-gatkINDELD16_PLUSdecoyhet
100.0000
100.0000
100.0000
99.6406
40400
gduggal-bwaplatINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10het
27.4510
15.9091
100.0000
99.6394
737700
gduggal-bwavardINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_merged*
65.0000
65.0000
65.0000
99.6383
1371375
71.4286
ltrigg-rtg2INDELC6_15lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.6377
10200
astatham-gatkINDELD1_5decoyhetalt
100.0000
100.0000
100.0000
99.6377
10100
ltrigg-rtg1INDELC6_15lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.6364
10200
ltrigg-rtg1INDELD1_5decoyhetalt
100.0000
100.0000
100.0000
99.6364
10100
ltrigg-rtg2INDELD1_5decoyhetalt
100.0000
100.0000
100.0000
99.6350
10100
qzeng-customINDELC1_5map_l125_m0_e0het
0.0000
0.0000
100.0000
99.6350
00100
eyeh-varpipeINDELI1_5decoyhomalt
0.0000
0.0000
100.0000
99.6339
00700
ltrigg-rtg1INDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.6330
20200
gduggal-snapplatINDELI1_5map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
99.6324
20100