PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NA Truth TPTruth FNQuery TPQuery FPFP gt% FP ma
10501-10550 / 86044 show all
ghariani-varprowlINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
ghariani-varprowlINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
ghariani-varprowlINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
ghariani-varprowlINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
ghariani-varprowlINDELI1_5segdupwithalt*
0.0000
100.0000
00000
ghariani-varprowlINDELI1_5segdupwithalthet
0.0000
100.0000
00000
ghariani-varprowlINDELI1_5segdupwithalthomalt
0.0000
100.0000
00000
ghariani-varprowlINDELI6_15decoy*
0.0000
100.0000
00000
ghariani-varprowlINDELI6_15decoyhet
0.0000
100.0000
00000
ghariani-varprowlINDELI6_15decoyhomalt
0.0000
100.0000
00000
ghariani-varprowlINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ghariani-varprowlINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ghariani-varprowlINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ghariani-varprowlINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ghariani-varprowlINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ghariani-varprowlINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ghariani-varprowlINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ghariani-varprowlINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ghariani-varprowlINDELI6_15lowcmp_SimpleRepeat_diTR_51to200*
1.0870
100.0000
191000
ghariani-varprowlINDELI6_15lowcmp_SimpleRepeat_diTR_51to200het
11.1111
100.0000
18000
ghariani-varprowlINDELI6_15lowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
100.0000
00000
ghariani-varprowlINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
02000
ghariani-varprowlINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
ghariani-varprowlINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
ghariani-varprowlINDELI6_15lowcmp_SimpleRepeat_triTR_51to200*
0.0000
100.0000
013000
ghariani-varprowlINDELI6_15lowcmp_SimpleRepeat_triTR_51to200het
0.0000
100.0000
01000
ghariani-varprowlINDELI6_15lowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
ghariani-varprowlINDELI6_15lowcmp_SimpleRepeat_triTR_gt200*
0.0000
100.0000
00000
ghariani-varprowlINDELI6_15lowcmp_SimpleRepeat_triTR_gt200het
0.0000
100.0000
00000
ghariani-varprowlINDELI6_15segdupwithalt*
0.0000
100.0000
00000
ghariani-varprowlINDELI6_15segdupwithalthet
0.0000
100.0000
00000
ghariani-varprowlINDELI6_15segdupwithalthomalt
0.0000
100.0000
00000
ghariani-varprowlSNP*decoy*
0.0000
100.0000
00000
ghariani-varprowlSNP*decoyhet
0.0000
100.0000
00000
ghariani-varprowlSNP*decoyhomalt
0.0000
100.0000
00000
ghariani-varprowlSNP*lowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ghariani-varprowlSNP*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ghariani-varprowlSNP*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ghariani-varprowlSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ghariani-varprowlSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ghariani-varprowlSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ghariani-varprowlSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ghariani-varprowlSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ghariani-varprowlSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ghariani-varprowlSNP*lowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
ghariani-varprowlSNP*lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
ghariani-varprowlSNP*lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
ghariani-varprowlSNP*lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
ghariani-varprowlSNP*lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
ghariani-varprowlSNP*lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000