PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NA Truth TPTruth FNQuery TPQuery FPFP gt% FP ma
85851-85900 / 86044 show all
rpoplin-dv42INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
02000
rpoplin-dv42INDELI16_PLUSlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELI16_PLUSlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELI16_PLUSlowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELI16_PLUSlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELI16_PLUSlowcmp_SimpleRepeat_triTR_gt200*
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELI16_PLUSlowcmp_SimpleRepeat_triTR_gt200het
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELI16_PLUSlowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELI16_PLUSlowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELC6_15tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELC6_15tech_badpromotershomalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELD16_PLUSHG002complexvarhetalt
0.0000
76.9231
0.0000
0.0000
19057000
qzeng-customINDELD16_PLUSHG002compoundhethetalt
0.0000
78.4232
0.0000
0.0000
1512416000
qzeng-customINDELD16_PLUSdecoyhetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELD16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELD16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
69.6410
0.0000
0.0000
679296000
qzeng-customINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
0.0000
0.0000
10000
qzeng-customINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
54.5455
0.0000
0.0000
65000
qzeng-customINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
0.0000
0.0000
10000
qzeng-customINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
73.6842
0.0000
0.0000
145000
qzeng-customINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
75.0000
0.0000
0.0000
93000
qzeng-customINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
67.5753
0.0000
0.0000
471226000
qzeng-customINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
77.3036
0.0000
0.0000
1250367000
qzeng-customINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
84.4280
0.0000
0.0000
797147000
qzeng-customINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
77.2589
0.0000
0.0000
1274375000
qzeng-customINDELD16_PLUSlowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
84.1837
0.0000
0.0000
660124000
qzeng-customINDELD16_PLUSlowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
56.0364
0.0000
0.0000
246193000
qzeng-customINDELD16_PLUSlowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELD16_PLUSlowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
91.6667
0.0000
0.0000
111000
qzeng-customINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
77.7778
0.0000
0.0000
72000
qzeng-customINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
79.1429
0.0000
0.0000
27773000
qzeng-customINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
96.0784
0.0000
0.0000
492000
qzeng-customINDELD16_PLUSlowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
80.0000
0.0000
0.0000
205000
qzeng-customINDELD16_PLUSmap_l100_m0_e0hetalt
0.0000
100.0000
0.0000
0.0000
40000
qzeng-customINDELD16_PLUSmap_l100_m1_e0hetalt
0.0000
73.0769
0.0000
0.0000
197000
qzeng-customINDELD16_PLUSmap_l100_m2_e0hetalt
0.0000
73.0769
0.0000
0.0000
197000
qzeng-customINDELD16_PLUSmap_l100_m2_e1hetalt
0.0000
70.0000
0.0000
0.0000
219000
qzeng-customINDELD16_PLUSmap_l125_m0_e0hetalt
0.0000
100.0000
0.0000
0.0000
10000
qzeng-customINDELD16_PLUSmap_l125_m1_e0hetalt
0.0000
100.0000
0.0000
0.0000
30000
qzeng-customINDELD16_PLUSmap_l125_m2_e0hetalt
0.0000
100.0000
0.0000
0.0000
30000
qzeng-customINDELD16_PLUSmap_l125_m2_e1hetalt
0.0000
75.0000
0.0000
0.0000
31000
qzeng-customINDELD16_PLUSmap_l150_m0_e0hetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELD16_PLUSmap_l150_m1_e0hetalt
0.0000
100.0000
0.0000
0.0000
10000
qzeng-customINDELD16_PLUSmap_l150_m2_e0hetalt
0.0000
100.0000
0.0000
0.0000
10000