PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NA Truth TPTruth FNQuery TPQuery FPFP gt% FP ma
801-850 / 86044 show all
qzeng-customINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
qzeng-customINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
01000
qzeng-customINDELI1_5lowcmp_SimpleRepeat_diTR_51to200hetalt
25.1397
100.0000
45134000
qzeng-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
qzeng-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
qzeng-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
qzeng-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
qzeng-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
10000
qzeng-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
qzeng-customINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
10000
qzeng-customINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
qzeng-customINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
10000
qzeng-customINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
qzeng-customINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
10000
qzeng-customINDELI1_5decoyhetalt
0.0000
100.0000
00000
qzeng-customINDELI1_5decoyhet
0.0000
100.0000
00000
qzeng-customINDELI16_PLUStech_badpromotershetalt
0.0000
100.0000
00000
qzeng-customINDELI16_PLUSsegdupwithalthomalt
0.0000
100.0000
00000
qzeng-customINDELI16_PLUSsegdupwithalthetalt
0.0000
100.0000
00000
qzeng-customINDELI16_PLUSsegdupwithalthet
0.0000
100.0000
00000
qzeng-customINDELI16_PLUSsegdupwithalt*
0.0000
100.0000
00000
qzeng-customINDELI16_PLUSmap_l250_m2_e1hetalt
0.0000
100.0000
00000
qzeng-customINDELI16_PLUSmap_l250_m2_e0hetalt
0.0000
100.0000
00000
qzeng-customINDELI16_PLUSmap_l250_m1_e0hetalt
0.0000
100.0000
00000
qzeng-customINDELI16_PLUSmap_l250_m0_e0homalt
0.0000
100.0000
00000
qzeng-customINDELI16_PLUSmap_l250_m0_e0hetalt
0.0000
100.0000
00000
qzeng-customINDELI16_PLUSmap_l150_m0_e0hetalt
0.0000
100.0000
01000
qzeng-customINDELI16_PLUSmap_l125_m0_e0hetalt
0.0000
100.0000
01000
qzeng-customINDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
qzeng-customINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
qzeng-customINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
100.0000
00000
qzeng-customINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
100.0000
02000
qzeng-customINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
qzeng-customINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
qzeng-customINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
qzeng-customINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
qzeng-customINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
qzeng-customINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
qzeng-customINDELI16_PLUSfunc_cdshetalt
0.0000
100.0000
01000
qzeng-customINDELI16_PLUSdecoyhomalt
0.0000
100.0000
00000
qzeng-customINDELI16_PLUSdecoyhetalt
0.0000
100.0000
00000
qzeng-customINDELI16_PLUSdecoyhet
0.0000
100.0000
00000
qzeng-customINDELI16_PLUSdecoy*
0.0000
100.0000
00000
qzeng-customINDELD6_15segdupwithalthomalt
0.0000
100.0000
00000
qzeng-customINDELD6_15segdupwithalthet
0.0000
100.0000
00000
qzeng-customINDELD6_15segdupwithalt*
0.0000
100.0000
00000
qzeng-customINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10hetalt
83.7838
100.0000
316000
qzeng-customINDELD6_15lowcmp_SimpleRepeat_diTR_51to200hetalt
43.4633
100.0000
379493000
qzeng-customINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
81.4493
100.0000
65641495000
qzeng-customINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
80.6384
100.0000
57851389000