PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt

« 1 2 ... 1645 1646 1647 1648 1649 1650 1651 1652 1653 ... 1720 1721 » 82401-82450 / 86044 show all
ciseli-custom	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_11to50	hetalt	0.0000	3.9384	0.0000	0.0000	23	561	0	0	0
ciseli-custom	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_51to200	hetalt	0.0000	4.1237	0.0000	0.0000	4	93	0	0	0
ciseli-custom	INDEL	D6_15	map_l100_m0_e0	hetalt		0.0000	0.0000	0.0000	0	19	0	0	0
ciseli-custom	INDEL	D6_15	map_l100_m1_e0	hetalt	0.0000	4.4118	0.0000	0.0000	3	65	0	0	0
ciseli-custom	INDEL	D6_15	map_l100_m2_e0	hetalt	0.0000	4.4118	0.0000	0.0000	3	65	0	0	0
ciseli-custom	INDEL	D6_15	map_l100_m2_e1	hetalt	0.0000	4.1096	0.0000	0.0000	3	70	0	0	0
ciseli-custom	INDEL	D6_15	map_l125_m0_e0	hetalt		0.0000	0.0000	0.0000	0	6	0	0	0
ciseli-custom	INDEL	D6_15	map_l125_m1_e0	hetalt	0.0000	5.2632	0.0000	0.0000	1	18	0	0	0
ciseli-custom	INDEL	D6_15	map_l125_m2_e0	hetalt	0.0000	5.2632	0.0000	0.0000	1	18	0	0	0
ciseli-custom	INDEL	D6_15	map_l125_m2_e1	hetalt	0.0000	5.0000	0.0000	0.0000	1	19	0	0	0
ciseli-custom	INDEL	D6_15	map_l150_m0_e0	hetalt		0.0000	0.0000	0.0000	0	5	0	0	0
ciseli-custom	INDEL	D6_15	map_l150_m1_e0	hetalt		0.0000	0.0000	0.0000	0	8	0	0	0
ciseli-custom	INDEL	D6_15	map_l150_m2_e0	hetalt		0.0000	0.0000	0.0000	0	8	0	0	0
ciseli-custom	INDEL	D6_15	map_l150_m2_e1	hetalt		0.0000	0.0000	0.0000	0	9	0	0	0
ciseli-custom	INDEL	D6_15	map_l250_m0_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	D6_15	map_l250_m1_e0	hetalt		0.0000	0.0000	0.0000	0	2	0	0	0
ciseli-custom	INDEL	D6_15	map_l250_m2_e0	hetalt		0.0000	0.0000	0.0000	0	2	0	0	0
ciseli-custom	INDEL	D6_15	map_l250_m2_e1	hetalt		0.0000	0.0000	0.0000	0	2	0	0	0
ciseli-custom	INDEL	D6_15	map_siren	hetalt	0.0000	7.0707	0.0000	0.0000	7	92	0	0	0
ciseli-custom	INDEL	D6_15	segdup	hetalt	0.0000	12.2449	0.0000	0.0000	6	43	0	0	0
ciseli-custom	INDEL	D6_15	segdupwithalt	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	D6_15	tech_badpromoters	hetalt		0.0000	0.0000	0.0000	0	1	0	0	0
ciseli-custom	INDEL	I16_PLUS	*	hetalt	0.0000	0.0477	0.0000	0.0000	1	2097	0	0	0
ciseli-custom	INDEL	I16_PLUS	HG002complexvar	hetalt	0.0000	0.2985	0.0000	0.0000	1	334	0	0	0
ciseli-custom	INDEL	I16_PLUS	HG002compoundhet	hetalt	0.0000	0.0478	0.0000	0.0000	1	2092	0	0	0
ciseli-custom	INDEL	I16_PLUS	decoy	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	I16_PLUS	func_cds	hetalt		0.0000	0.0000	0.0000	0	1	0	0	0
ciseli-custom	INDEL	I16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	86	0	0	0
ciseli-custom	INDEL	I16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	I16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	583	0	0	0
ciseli-custom	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt		0.0000	0.0000	0.0000	0	659	0	0	0
ciseli-custom	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	18	0	0	0
ciseli-custom	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	35	0	0	0
ciseli-custom	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	20	0	0	0
ciseli-custom	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	59	0	0	0
ciseli-custom	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	341	0	0	0
ciseli-custom	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	286	0	0	0
ciseli-custom	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	380	0	0	0
ciseli-custom	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt		0.0000	0.0000	0.0000	0	659	0	0	0
ciseli-custom	INDEL	I16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	hetalt		0.0000	0.0000	0.0000	0	279	0	0	0
ciseli-custom	INDEL	I16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	hetalt		0.0000	0.0000	0.0000	0	2	0	0	0
ciseli-custom	INDEL	I16_PLUS	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt		0.0000	0.0000	0.0000	0	28	0	0	0
ciseli-custom	INDEL	I16_PLUS	lowcmp_SimpleRepeat_homopolymer_gt10	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ciseli-custom	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	hetalt		0.0000	0.0000	0.0000	0	175	0	0	0
ciseli-custom	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_51to200	hetalt		0.0000	0.0000	0.0000	0	23	0	0	0

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge