PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NA Truth TPTruth FNQuery TPQuery FPFP gt% FP ma
8151-8200 / 86044 show all
hfeng-pmm2SNPtvlowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
hfeng-pmm2SNPtvlowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
100.0000
01000
hfeng-pmm2SNPtvlowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
hfeng-pmm2SNPtvmap_l250_m0_e0hetalt
0.0000
100.0000
00000
hfeng-pmm2SNPtvsegdupwithalt*
0.0000
100.0000
00000
hfeng-pmm2SNPtvsegdupwithalthet
0.0000
100.0000
00000
hfeng-pmm2SNPtvsegdupwithalthetalt
0.0000
100.0000
00000
hfeng-pmm2SNPtvsegdupwithalthomalt
0.0000
100.0000
00000
hfeng-pmm3INDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
hfeng-pmm3INDEL*lowcmp_SimpleRepeat_diTR_gt200*
0.0000
100.0000
00000
hfeng-pmm3INDEL*lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
100.0000
00000
hfeng-pmm3INDEL*lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
hfeng-pmm3INDEL*lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
hfeng-pmm3INDEL*map_l250_m0_e0hetalt
0.0000
100.0000
00000
hfeng-pmm3INDEL*segdupwithalthetalt
0.0000
100.0000
00000
hfeng-pmm3INDEL*segdupwithalthomalt
0.0000
100.0000
00000
hfeng-pmm3INDELD16_PLUSdecoyhetalt
0.0000
100.0000
00000
hfeng-pmm3INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
hfeng-pmm3INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
hfeng-pmm3INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
hfeng-pmm3INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
hfeng-pmm3INDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
hfeng-pmm3INDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
jlack-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
jlack-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
jlack-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
jlack-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
jlack-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
jlack-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
jlack-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
jlack-gatkINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200het
50.0000
100.0000
11000
jlack-gatkINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
jlack-gatkINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
jlack-gatkINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_51to200het
100.0000
100.0000
30000
jlack-gatkINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_51to200homalt
0.0000
100.0000
00000
jlack-gatkINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
jlack-gatkINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
jlack-gatkINDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
jlack-gatkINDELI16_PLUSmap_l250_m0_e0hetalt
0.0000
100.0000
00000
jlack-gatkINDELI16_PLUSmap_l250_m0_e0homalt
0.0000
100.0000
00000
jlack-gatkINDELI16_PLUSmap_l250_m1_e0hetalt
0.0000
100.0000
00000
jlack-gatkINDELI16_PLUSmap_l250_m1_e0homalt
0.0000
100.0000
00000
jlack-gatkINDELI16_PLUSmap_l250_m2_e0hetalt
0.0000
100.0000
00000
jlack-gatkINDELI16_PLUSmap_l250_m2_e0homalt
0.0000
100.0000
00000
jlack-gatkINDELI16_PLUSmap_l250_m2_e1hetalt
0.0000
100.0000
00000
jlack-gatkINDELI16_PLUSmap_l250_m2_e1homalt
0.0000
100.0000
00000
jlack-gatkINDELI16_PLUSsegdupwithalt*
0.0000
100.0000
00000
jlack-gatkINDELI16_PLUSsegdupwithalthet
0.0000
100.0000
00000
jlack-gatkINDELI16_PLUSsegdupwithalthetalt
0.0000
100.0000
00000
jlack-gatkINDELI16_PLUSsegdupwithalthomalt
0.0000
100.0000
00000