PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NA Truth TPTruth FNQuery TPQuery FPFP gt% FP ma
75151-75200 / 86044 show all
jpowers-varprowlSNPtvlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlSNPtvlowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.0000
0.0000
01000
jpowers-varprowlSNPtvlowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlSNPtvlowcmp_SimpleRepeat_triTR_gt200*
0.0000
0.0000
0.0000
00000
jpowers-varprowlSNPtvlowcmp_SimpleRepeat_triTR_gt200het
0.0000
0.0000
0.0000
00000
jpowers-varprowlSNPtvlowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlSNPtvlowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlSNPtvmap_l100_m0_e0hetalt
0.0000
0.0000
0.0000
016000
jpowers-varprowlSNPtvmap_l100_m1_e0hetalt
0.0000
0.0000
0.0000
041000
jpowers-varprowlSNPtvmap_l100_m2_e0hetalt
0.0000
0.0000
0.0000
042000
jpowers-varprowlSNPtvmap_l100_m2_e1hetalt
0.0000
0.0000
0.0000
043000
jpowers-varprowlSNPtvmap_l125_m0_e0hetalt
0.0000
0.0000
0.0000
09000
jpowers-varprowlSNPtvmap_l125_m1_e0hetalt
0.0000
0.0000
0.0000
030000
jpowers-varprowlSNPtvmap_l125_m2_e0hetalt
0.0000
0.0000
0.0000
030000
jpowers-varprowlSNPtvmap_l125_m2_e1hetalt
0.0000
0.0000
0.0000
030000
jpowers-varprowlSNPtvmap_l150_m0_e0hetalt
0.0000
0.0000
0.0000
03000
jpowers-varprowlSNPtvmap_l150_m1_e0hetalt
0.0000
0.0000
0.0000
020000
jpowers-varprowlSNPtvmap_l150_m2_e0hetalt
0.0000
0.0000
0.0000
020000
jpowers-varprowlSNPtvmap_l150_m2_e1hetalt
0.0000
0.0000
0.0000
020000
jpowers-varprowlSNPtvmap_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlSNPtvmap_l250_m1_e0hetalt
0.0000
0.0000
0.0000
04000
jpowers-varprowlSNPtvmap_l250_m2_e0hetalt
0.0000
0.0000
0.0000
05000
jpowers-varprowlSNPtvmap_l250_m2_e1hetalt
0.0000
0.0000
0.0000
05000
jpowers-varprowlSNPtvmap_sirenhetalt
0.0000
0.0000
0.0000
081000
jpowers-varprowlSNPtvsegduphetalt
0.0000
0.0000
0.0000
07000
jpowers-varprowlSNPtvsegdupwithalthetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlSNPtvtech_badpromotershetalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg1INDELC16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg1INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg2INDELD16_PLUStech_badpromotershet
100.0000
100.0000
100.0000
0.0000
40400
ltrigg-rtg2INDELD16_PLUStech_badpromotershetalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg2INDELI16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
01000
ltrigg-rtg2INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
ltrigg-rtg2INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
ltrigg-rtg2INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg2INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg2INDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200het
0.0000
0.0000
0.0000
02010
0.0000
ltrigg-rtg2INDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg2INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg2INDELI6_15lowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg2SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg2SNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg2SNP*lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
100.0000
0.0000
00100
ltrigg-rtg2SNP*lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg2SNP*lowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.0000
0.0000
01000
ltrigg-rtg2SNP*lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg2SNP*tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg2SNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg2SNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg2SNPtilowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
100.0000
0.0000
00100