PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NA Truth TPTruth FNQuery TPQuery FPFP gt% FP ma
74951-75000 / 86044 show all
jpowers-varprowlINDELI1_5map_l100_m2_e0hetalt
0.0000
0.0000
0.0000
044000
jpowers-varprowlINDELI1_5map_l100_m2_e1hetalt
0.0000
0.0000
0.0000
045000
jpowers-varprowlINDELI1_5map_l125_m0_e0hetalt
0.0000
0.0000
0.0000
04000
jpowers-varprowlINDELI1_5map_l125_m1_e0hetalt
0.0000
0.0000
0.0000
017000
jpowers-varprowlINDELI1_5map_l125_m2_e0hetalt
0.0000
0.0000
0.0000
019000
jpowers-varprowlINDELI1_5map_l125_m2_e1hetalt
0.0000
0.0000
0.0000
019000
jpowers-varprowlINDELI1_5map_l150_m0_e0hetalt
0.0000
0.0000
0.0000
03000
jpowers-varprowlINDELI1_5map_l150_m1_e0hetalt
0.0000
0.0000
0.0000
09000
jpowers-varprowlINDELI1_5map_l150_m2_e0hetalt
0.0000
0.0000
0.0000
09000
jpowers-varprowlINDELI1_5map_l150_m2_e1hetalt
0.0000
0.0000
0.0000
010000
jpowers-varprowlINDELI1_5map_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELI1_5map_l250_m1_e0hetalt
0.0000
0.0000
0.0000
02000
jpowers-varprowlINDELI1_5map_l250_m2_e0hetalt
0.0000
0.0000
0.0000
02000
jpowers-varprowlINDELI1_5map_l250_m2_e1hetalt
0.0000
0.0000
0.0000
02000
jpowers-varprowlINDELI1_5map_sirenhetalt
0.0000
0.0000
0.0000
0112000
jpowers-varprowlINDELI1_5segduphetalt
0.0000
0.0000
0.0000
048000
jpowers-varprowlINDELI1_5segdupwithalthetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELI1_5tech_badpromotershetalt
0.0000
0.0000
0.0000
01000
jpowers-varprowlINDELI6_15*hetalt
0.0000
0.3508
0.0000
0.0000
308521000
jpowers-varprowlINDELI6_15HG002complexvarhetalt
0.0000
1.3083
0.0000
0.0000
161207000
jpowers-varprowlINDELI6_15HG002compoundhethetalt
0.0000
0.3514
0.0000
0.0000
308507000
jpowers-varprowlINDELI6_15decoyhetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELI6_15func_cdshetalt
0.0000
0.0000
0.0000
04000
jpowers-varprowlINDELI6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.3774
0.0000
0.0000
2528000
jpowers-varprowlINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELI6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.5449
0.0000
0.0000
173103000
jpowers-varprowlINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
0.4821
0.0000
0.0000
173509000
jpowers-varprowlINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
3.2787
0.0000
0.0000
259000
jpowers-varprowlINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
2.3529
0.0000
0.0000
283000
jpowers-varprowlINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
1.9231
0.0000
0.0000
151000
jpowers-varprowlINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
0363000
jpowers-varprowlINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
0.1969
0.0000
0.0000
52534000
jpowers-varprowlINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
0.2283
0.0000
0.0000
52185000
jpowers-varprowlINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
0.2648
0.0000
0.0000
72637000
jpowers-varprowlINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
0.4821
0.0000
0.0000
173509000
jpowers-varprowlINDELI6_15lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.5082
0.0000
0.0000
91762000
jpowers-varprowlINDELI6_15lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
083000
jpowers-varprowlINDELI6_15lowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELI6_15lowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELI6_15lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELI6_15lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
0.0000
0.0000
044000
jpowers-varprowlINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
02000
jpowers-varprowlINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.7800
0.0000
0.0000
5636000
jpowers-varprowlINDELI6_15lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
0151000
jpowers-varprowlINDELI6_15lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELI6_15lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000