PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NA Truth TPTruth FNQuery TPQuery FPFP gt% FP ma
74751-74800 / 86044 show all
jpowers-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
0.3515
0.0000
0.0000
257087000
jpowers-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
0.3862
0.0000
0.0000
215417000
jpowers-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
0.3485
0.0000
0.0000
257149000
jpowers-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
0.3847
0.0000
0.0000
318028000
jpowers-varprowlINDELD6_15lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.3772
0.0000
0.0000
184754000
jpowers-varprowlINDELD6_15lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
0872000
jpowers-varprowlINDELD6_15lowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD6_15lowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD6_15lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD6_15lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
0.0000
0.0000
037000
jpowers-varprowlINDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
09000
jpowers-varprowlINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.5922
0.0000
0.0000
71175000
jpowers-varprowlINDELD6_15lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.7566
0.0000
0.0000
6787000
jpowers-varprowlINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD6_15lowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.6849
0.0000
0.0000
4580000
jpowers-varprowlINDELD6_15lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
097000
jpowers-varprowlINDELD6_15map_l100_m0_e0hetalt
0.0000
0.0000
0.0000
019000
jpowers-varprowlINDELD6_15map_l100_m1_e0hetalt
0.0000
1.4706
0.0000
0.0000
167000
jpowers-varprowlINDELD6_15map_l100_m2_e0hetalt
0.0000
1.4706
0.0000
0.0000
167000
jpowers-varprowlINDELD6_15map_l100_m2_e1hetalt
0.0000
1.3699
0.0000
0.0000
172000
jpowers-varprowlINDELD6_15map_l125_m0_e0hetalt
0.0000
0.0000
0.0000
06000
jpowers-varprowlINDELD6_15map_l125_m1_e0hetalt
0.0000
0.0000
0.0000
019000
jpowers-varprowlINDELD6_15map_l125_m2_e0hetalt
0.0000
0.0000
0.0000
019000
jpowers-varprowlINDELD6_15map_l125_m2_e1hetalt
0.0000
0.0000
0.0000
020000
jpowers-varprowlINDELD6_15map_l150_m0_e0hetalt
0.0000
0.0000
0.0000
05000
jpowers-varprowlINDELD6_15map_l150_m1_e0hetalt
0.0000
0.0000
0.0000
08000
jpowers-varprowlINDELD6_15map_l150_m2_e0hetalt
0.0000
0.0000
0.0000
08000
jpowers-varprowlINDELD6_15map_l150_m2_e1hetalt
0.0000
0.0000
0.0000
09000
jpowers-varprowlINDELD6_15map_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD6_15map_l250_m1_e0hetalt
0.0000
0.0000
0.0000
02000
jpowers-varprowlINDELD6_15map_l250_m2_e0hetalt
0.0000
0.0000
0.0000
02000
jpowers-varprowlINDELD6_15map_l250_m2_e1hetalt
0.0000
0.0000
0.0000
02000
jpowers-varprowlINDELD6_15map_sirenhetalt
0.0000
1.0101
0.0000
0.0000
198000
jpowers-varprowlINDELD6_15segduphetalt
0.0000
2.0408
0.0000
0.0000
148000
jpowers-varprowlINDELD6_15segdupwithalthetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD6_15tech_badpromotershetalt
0.0000
0.0000
0.0000
01000
jpowers-varprowlINDELI16_PLUS*hetalt
0.0000
0.3337
0.0000
0.0000
72091000
jpowers-varprowlINDELI16_PLUSHG002complexvarhetalt
0.0000
0.8955
0.0000
0.0000
3332000
jpowers-varprowlINDELI16_PLUSHG002compoundhethetalt
0.0000
0.3344
0.0000
0.0000
72086000
jpowers-varprowlINDELI16_PLUSdecoyhetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELI16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
01000
jpowers-varprowlINDELI16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
1.1628
0.0000
0.0000
185000
ltrigg-rtg1INDELC16_PLUSmap_l250_m0_e0het
0.0000
0.0000
0.0000
00000
ltrigg-rtg1INDELC16_PLUSmap_l250_m0_e0homalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg1INDELC16_PLUStech_badpromotershet
0.0000
0.0000
0.0000
00000