PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NA Truth TPTruth FNQuery TPQuery FPFP gt% FP ma
74651-74700 / 86044 show all
jpowers-varprowlINDELD16_PLUSlowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.2278
0.0000
0.0000
1438000
jpowers-varprowlINDELD16_PLUSlowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD16_PLUSlowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
0.0000
0.0000
012000
jpowers-varprowlINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
09000
jpowers-varprowlINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.3049
0.0000
0.0000
1327000
jpowers-varprowlINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
0350000
jpowers-varprowlINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.0000
0.0000
051000
jpowers-varprowlINDELD16_PLUSlowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
025000
jpowers-varprowlINDELD16_PLUSmap_l100_m0_e0hetalt
0.0000
0.0000
0.0000
04000
jpowers-varprowlINDELD16_PLUSmap_l100_m1_e0hetalt
0.0000
3.8462
0.0000
0.0000
125000
jpowers-varprowlINDELD16_PLUSmap_l100_m2_e0hetalt
0.0000
3.8462
0.0000
0.0000
125000
jpowers-varprowlINDELD16_PLUSmap_l100_m2_e1hetalt
0.0000
3.3333
0.0000
0.0000
129000
jpowers-varprowlINDELD16_PLUSmap_l125_m0_e0hetalt
0.0000
0.0000
0.0000
01000
jpowers-varprowlINDELD16_PLUSmap_l125_m1_e0hetalt
0.0000
0.0000
0.0000
03000
jpowers-varprowlINDELD16_PLUSmap_l125_m2_e0hetalt
0.0000
0.0000
0.0000
03000
jpowers-varprowlINDELD16_PLUSmap_l125_m2_e1hetalt
0.0000
0.0000
0.0000
04000
jpowers-varprowlINDELD16_PLUSmap_l150_m0_e0hetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD16_PLUSmap_l150_m1_e0hetalt
0.0000
0.0000
0.0000
01000
jpowers-varprowlINDELD16_PLUSmap_l150_m2_e0hetalt
0.0000
0.0000
0.0000
01000
jpowers-varprowlINDELD16_PLUSmap_l150_m2_e1hetalt
0.0000
0.0000
0.0000
02000
jpowers-varprowlINDELD16_PLUSmap_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD16_PLUSmap_l250_m1_e0hetalt
0.0000
0.0000
0.0000
01000
jpowers-varprowlINDELD16_PLUSmap_l250_m2_e0hetalt
0.0000
0.0000
0.0000
01000
jpowers-varprowlINDELD16_PLUSmap_l250_m2_e1hetalt
0.0000
0.0000
0.0000
01000
jpowers-varprowlINDELD16_PLUSmap_sirenhetalt
0.0000
3.2258
0.0000
0.0000
130000
jpowers-varprowlINDELD16_PLUSsegduphetalt
0.0000
0.0000
0.0000
09000
jpowers-varprowlINDELD16_PLUSsegdupwithalthetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD16_PLUStech_badpromotershet
66.6667
50.0000
100.0000
0.0000
22200
jpowers-varprowlINDELD16_PLUStech_badpromotershetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD1_5*hetalt
0.0000
0.5076
0.0000
0.0000
5210193000
jpowers-varprowlINDELD1_5HG002complexvarhetalt
0.0000
1.9970
0.0000
0.0000
271325000
jpowers-varprowlINDELD1_5HG002compoundhethetalt
0.0000
0.4992
0.0000
0.0000
5110165000
jpowers-varprowlINDELD1_5decoyhetalt
0.0000
0.0000
0.0000
01000
jpowers-varprowlINDELD1_5func_cdshetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.2744
0.0000
0.0000
51817000
jpowers-varprowlINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
jpowers-varprowlINDELD1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.5379
0.0000
0.0000
509246000
jpowers-varprowlINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
0.4843
0.0000
0.0000
459246000
jpowers-varprowlINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
1.4493
0.0000
0.0000
168000
jpowers-varprowlINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
jpowers-varprowlINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
1.3514
0.0000
0.0000
173000
jpowers-varprowlINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
2.7027
0.0000
0.0000
136000
jpowers-varprowlINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.2324
0.0000
0.0000
31288000
jpowers-varprowlINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
jpowers-varprowlINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
0.4818
0.0000
0.0000
398056000