PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NA Truth TPTruth FNQuery TPQuery FPFP gt% FP ma
71751-71800 / 86044 show all
gduggal-snapvardINDELD6_15map_l100_m1_e0hetalt
0.0000
38.2353
0.0000
0.0000
2642000
gduggal-snapvardINDELD6_15map_l100_m2_e0hetalt
0.0000
38.2353
0.0000
0.0000
2642000
gduggal-snapvardINDELD6_15map_l100_m2_e1hetalt
0.0000
35.6164
0.0000
0.0000
2647000
gduggal-snapvardINDELD6_15map_l125_m0_e0hetalt
0.0000
50.0000
0.0000
0.0000
33000
gduggal-snapvardINDELD6_15map_l125_m1_e0hetalt
0.0000
57.8947
0.0000
0.0000
118000
gduggal-snapvardINDELD6_15map_l125_m2_e0hetalt
0.0000
57.8947
0.0000
0.0000
118000
gduggal-snapvardINDELD6_15map_l125_m2_e1hetalt
0.0000
55.0000
0.0000
0.0000
119000
gduggal-snapvardINDELD6_15map_l150_m0_e0hetalt
0.0000
60.0000
0.0000
0.0000
32000
gduggal-snapvardINDELD6_15map_l150_m1_e0hetalt
0.0000
62.5000
0.0000
0.0000
53000
gduggal-snapvardINDELD6_15map_l150_m2_e0hetalt
0.0000
62.5000
0.0000
0.0000
53000
gduggal-snapvardINDELD6_15map_l150_m2_e1hetalt
0.0000
55.5556
0.0000
0.0000
54000
gduggal-snapvardINDELD6_15map_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD6_15map_l250_m1_e0hetalt
0.0000
0.0000
0.0000
02000
gduggal-snapvardINDELD6_15map_l250_m2_e0hetalt
0.0000
0.0000
0.0000
02000
gduggal-snapvardINDELD6_15map_l250_m2_e1hetalt
0.0000
0.0000
0.0000
02000
gduggal-snapvardINDELD6_15map_sirenhetalt
0.0000
36.3636
0.0000
0.0000
3663000
gduggal-snapvardINDELD6_15segduphetalt
0.0000
55.1020
0.0000
0.0000
2722000
gduggal-snapvardINDELD6_15segdupwithalthetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD6_15tech_badpromotershetalt
0.0000
100.0000
0.0000
0.0000
10000
gduggal-snapvardINDELD6_15tech_badpromotershomalt
28.5714
16.6667
100.0000
0.0000
15100
gduggal-snapvardINDELI16_PLUS*hetalt
0.0000
0.4290
0.0000
0.0000
92089000
gduggal-snapvardINDELI16_PLUSHG002complexvarhetalt
0.0000
0.0000
0.0000
0335000
gduggal-snapvardINDELI16_PLUSHG002compoundhethetalt
0.0000
0.4300
0.0000
0.0000
92084000
gduggal-snapvardINDELI16_PLUSdecoyhetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELI16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
01000
gduggal-snapvardINDELI16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
086000
gduggal-snapvardINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
0583000
gduggal-snapvardINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
0.0000
0.0000
0659000
gduggal-snapvardINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
018000
gduggal-snapvardINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
035000
gduggal-snapvardINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
020000
gduggal-snapvardINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
059000
gduggal-snapvardINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
0341000
gduggal-snapvardINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
0286000
gduggal-snapvardINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
0380000
gduggal-snapvardINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
0.0000
0.0000
0659000
gduggal-snapvardINDELI16_PLUSlowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.0000
0.0000
0279000
gduggal-snapvardINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200*
0.0000
0.0000
0.0000
04000
gduggal-snapvardINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200het
0.0000
0.0000
0.0000
02000
gduggal-snapvardINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
02000
gduggal-snapvardINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELI16_PLUSlowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELI16_PLUSlowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELI16_PLUSlowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000