PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NA Truth TPTruth FNQuery TPQuery FPFP gt% FP ma
71601-71650 / 86044 show all
gduggal-snapvardINDELC6_15segdupwithalthetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELC6_15tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD16_PLUS*hetalt
0.0000
1.3451
0.0000
0.0000
261907000
gduggal-snapvardINDELD16_PLUSHG002complexvarhetalt
0.0000
0.8097
0.0000
0.0000
2245000
gduggal-snapvardINDELD16_PLUSHG002compoundhethetalt
0.0000
1.3485
0.0000
0.0000
261902000
gduggal-snapvardINDELD16_PLUSHG002compoundhethomalt
0.0000
0.0000
0.0000
08000
gduggal-snapvardINDELD16_PLUSdecoyhetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD16_PLUSfunc_cdshomalt
0.0000
0.0000
0.0000
04000
gduggal-snapvardINDELD16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
1.0256
0.0000
0.0000
10965000
gduggal-snapvardINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
gduggal-snapvardINDELD16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
1.6229
0.0000
0.0000
211273000
gduggal-snapvardINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
1.3465
0.0000
0.0000
261905000
gduggal-snapvardINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
011000
gduggal-snapvardINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
gduggal-snapvardINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
019000
gduggal-snapvardINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
012000
gduggal-snapvardINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
1.1478
0.0000
0.0000
8689000
gduggal-snapvardINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
1.5461
0.0000
0.0000
251592000
gduggal-snapvardINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
1.8008
0.0000
0.0000
17927000
gduggal-snapvardINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
1.5161
0.0000
0.0000
251624000
gduggal-snapvardINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
1.3465
0.0000
0.0000
261905000
gduggal-snapvardINDELD16_PLUSlowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.7653
0.0000
0.0000
6778000
gduggal-snapvardINDELD16_PLUSlowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.6834
0.0000
0.0000
3436000
gduggal-snapvardINDELD16_PLUSlowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD16_PLUSlowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD16_PLUSlowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD16_PLUSlowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
0.0000
0.0000
012000
gduggal-snapvardINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
09000
gduggal-snapvardINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
3.3537
0.0000
0.0000
11317000
gduggal-snapvardINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.8571
0.0000
0.0000
3347000
gduggal-snapvardINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
3.9216
0.0000
0.0000
249000
gduggal-snapvardINDELD16_PLUSlowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
025000
gduggal-snapvardINDELD16_PLUSlowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
0.0000
0.0000
013000
gduggal-snapvardINDELD16_PLUSmap_l100_m0_e0hetalt
0.0000
0.0000
0.0000
04000
gduggal-snapvardINDELD16_PLUSmap_l100_m1_e0hetalt
0.0000
0.0000
0.0000
026000
gduggal-snapvardINDELD16_PLUSmap_l100_m2_e0hetalt
0.0000
0.0000
0.0000
026000
gduggal-snapvardINDELD16_PLUSmap_l100_m2_e1hetalt
0.0000
0.0000
0.0000
030000
gduggal-snapvardINDELD16_PLUSmap_l125_m0_e0hetalt
0.0000
0.0000
0.0000
01000
gduggal-snapvardINDELD16_PLUSmap_l125_m1_e0hetalt
0.0000
0.0000
0.0000
03000
gduggal-snapvardINDELD16_PLUSmap_l125_m2_e0hetalt
0.0000
0.0000
0.0000
03000
gduggal-snapvardINDELD16_PLUSmap_l125_m2_e1hetalt
0.0000
0.0000
0.0000
04000
gduggal-snapvardINDELD16_PLUSmap_l150_m0_e0hetalt
0.0000
0.0000
0.0000
00000