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Explore HG002 comparison results
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EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NA Truth TPTruth FNQuery TPQuery FPFP gt% FP ma
66051-66100 / 86044 show all
hfeng-pmm3SNPti**
99.9596
99.9417
99.9775
17.0194
20842951216208423646946
9.8081
gduggal-bwafbSNPti*homalt
99.9234
99.8676
99.9793
17.0184
8019761063801993166111
66.8675
ltrigg-rtg2SNP**homalt
99.9694
99.9515
99.9872
17.0159
11795855721179505151139
92.0530
dgrover-gatkSNPtiHG002complexvarhet
99.9452
99.9164
99.9739
17.0118
3145032633144498232
39.0244
ltrigg-rtg2SNP***
99.8749
99.8935
99.8562
17.0058
3051374325230515314395283
6.4391
ltrigg-rtg2SNP**het
99.8157
99.8572
99.7742
16.9842
1870922267618711584235135
3.1877
ltrigg-rtg2SNPtiHG002complexvarhet
99.8501
99.7528
99.9475
16.9710
31398877831399216546
27.8788
mlin-fermikitSNPtiHG002complexvar*
98.2652
97.2431
99.3090
16.9696
4944201401749440534403276
95.2326
bgallagher-sentieonSNPtiHG002complexvarhet
99.9477
99.9234
99.9720
16.9632
3145252413144718829
32.9545
jli-customSNPtiHG002complexvarhet
99.9353
99.9002
99.9704
16.9557
3144523143144189332
34.4086
egarrison-hhgaSNPtiHG002complexvarhet
99.8118
99.6651
99.9589
16.9554
313712105431371512951
39.5349
ndellapenna-hhgaSNPti*het
99.8668
99.7824
99.9512
16.9483
12791022789127910362483
13.3013
ckim-isaacSNP*HG002complexvar*
95.9550
92.3552
99.8467
16.9098
696714576716970671070847
79.1589
jli-customSNPti**
99.9536
99.9637
99.9435
16.8976
208475575620847161179130
11.0263
ndellapenna-hhgaSNPti**
99.8903
99.8233
99.9574
16.8793
208182536862081847888298
33.5586
ndellapenna-hhgaSNPtiHG002complexvarhet
99.7687
99.5752
99.9630
16.8677
313429133731343011649
42.2414
ckim-isaacSNP**het
98.6547
97.3796
99.9637
16.8583
182450549096182510166363
9.5023
egarrison-hhgaSNPti*homalt
99.9365
99.8935
99.9794
16.8582
802183855802203165113
68.4848
rpoplin-dv42SNPti*homalt
99.9800
99.9747
99.9853
16.8487
802835203802832118106
89.8305
rpoplin-dv42SNPtiHG002complexvarhet
99.9002
99.8243
99.9761
16.8206
3142135533141527555
73.3333
hfeng-pmm3SNPtiHG002complexvarhet
99.8511
99.7192
99.9834
16.8098
3138828843138325210
19.2308
gduggal-bwavardSNP**homalt
99.5128
99.0597
99.9700
16.7717
1169065110971159771348269
77.2989
hfeng-pmm1SNPti*het
99.9312
99.8931
99.9694
16.7684
12805211370128047039229
7.3980
hfeng-pmm2SNPti*homalt
99.9915
99.9903
99.9927
16.7561
802960788029525948
81.3559
hfeng-pmm1SNPti**
99.9548
99.9307
99.9789
16.7547
20840651446208400744067
15.2273
raldana-dualsentieonSNPtiHG002complexvarhet
99.8369
99.6928
99.9815
16.7345
313799967313748589
15.5172
ndellapenna-hhgaSNPti*homalt
99.9286
99.8893
99.9678
16.7330
802149889802170258209
81.0078
hfeng-pmm1SNPti*homalt
99.9926
99.9908
99.9944
16.6970
802964748029574535
77.7778
anovak-vgSNP**homalt
99.1091
98.7819
99.4384
16.6644
116578714375115843965435522
84.3955
hfeng-pmm2SNPtiHG002complexvarhet
99.8373
99.6928
99.9822
16.6591
313799967313749567
12.5000
hfeng-pmm3SNPti*homalt
99.9929
99.9905
99.9953
16.6242
802962768029533827
71.0526
hfeng-pmm1SNPtiHG002complexvarhet
99.8377
99.6899
99.9860
16.6225
3137909763137394410
22.7273
ckim-isaacSNPtv*homalt
98.1562
96.3855
99.9931
16.5795
363492136313635152518
72.0000
eyeh-varpipeINDELD6_15lowcmp_SimpleRepeat_diTR_51to200homalt
34.9475
95.6522
21.3793
16.5708
1547155570530
92.9825
ckim-isaacSNP*HG002complexvarhet
96.2337
92.7890
99.9440
16.5252
4319333356743223024235
14.4628
mlin-fermikitSNP***
98.8629
98.2311
99.5029
16.3803
30006025403230005271499012200
81.3876
ltrigg-rtg1SNPti*het
99.8539
99.8618
99.8460
16.3632
128012317711280140197552
2.6329
eyeh-varpipeSNPti*homalt
99.9720
99.9710
99.9731
16.3629
80280623379029721389
41.7840
ltrigg-rtg1SNPti**
99.8970
99.8948
99.8992
16.3223
2083318219420832412102174
8.2778
ckim-vqsrSNPti*homalt
99.0608
98.1423
99.9967
16.3042
788120149187881112625
96.1538
cchapple-customSNP**homalt
99.9445
99.8940
99.9951
16.2464
1178910125111776365851
87.9310
ltrigg-rtg1SNPti*homalt
99.9664
99.9474
99.9854
16.2302
802614422802519117112
95.7265
ckim-isaacSNPtiHG002complexvarhomalt
95.8992
92.1386
99.9798
16.1839
178255152091782863629
80.5556
ckim-gatkSNPti*homalt
99.6240
99.2571
99.9936
16.1503
79707259667970635133
64.7059
jmaeng-gatkSNPti*homalt
99.6264
99.2642
99.9912
16.0789
79712959097971207046
65.7143
gduggal-snapvardSNPti*homalt
99.4493
98.9663
99.9370
16.0694
7947388301790421498326
65.4618
asubramanian-gatkSNPti*homalt
98.9721
97.9680
99.9969
16.0441
786720163187867112422
91.6667
ckim-isaacSNP***
98.5357
97.1616
99.9494
15.9907
29679308670429685841504880
58.5106
qzeng-customSNPti*homalt
99.6207
99.3383
99.9047
15.9860
7977255314792891756473
62.5661
jlack-gatkSNPti*homalt
99.9698
99.9522
99.9874
15.9699
80265438480264410166
65.3465